RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 RETSATQ6NUM9 610 aa18.9■□□□□ 0.62
POLR1E-203ENST00000442009 NEPROQ6NW34 567 aa18.9■□□□□ 0.62
POLR1E-203ENST00000442009 C2CD4AQ8NCU7 369 aaPredicted RBP18.9■□□□□ 0.62
POLR1E-203ENST00000442009 ACVR1CQ8NER5 493 aa18.9■□□□□ 0.62
POLR1E-203ENST00000442009 ZNF75CPQ92670 426 aaPredicted RBP18.9■□□□□ 0.62
POLR1E-203ENST00000442009 VPS39Q96JC1 886 aa18.9■□□□□ 0.62
POLR1E-203ENST00000442009 GPR22Q99680 433 aa18.9■□□□□ 0.62
POLR1E-203ENST00000442009 PBX4Q9BYU1 374 aa18.9■□□□□ 0.62
POLR1E-203ENST00000442009 ABCB8Q9NUT2 735 aa18.9■□□□□ 0.62
POLR1E-203ENST00000442009 CHKBQ9Y259 395 aa18.9■□□□□ 0.62
POLR1E-203ENST00000442009 NUP210Q8TEM1 1887 aaPredicted RBP18.89■□□□□ 0.62
POLR1E-203ENST00000442009 K7ERQ8 282 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 CYBBP04839 570 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 PDHA1P08559 390 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 CEBPBP17676 345 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 WEE1P30291 646 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 HADHAP40939 763 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 GKAP1Q5VSY0 366 aaPredicted RBP18.89■□□□□ 0.61
POLR1E-203ENST00000442009 KIAA0408Q6ZU52 694 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 RNF135Q8IUD6 432 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 ARID3BQ8IVW6 561 aaPredicted RBP18.89■□□□□ 0.61
POLR1E-203ENST00000442009 DENND6AQ8IWF6 608 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 SPOCK2Q92563 424 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 LMAN2LQ9H0V9 348 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 CERS4Q9HA82 394 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 SNX15Q9NRS6 342 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 FCF1Q9Y324 198 aaKnown RBP18.89■□□□□ 0.61
POLR1E-203ENST00000442009 KCTD3Q9Y597 815 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 RAI2Q9Y5P3 530 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 CDH23Q9H251 3354 aa18.89■□□□□ 0.61
POLR1E-203ENST00000442009 EBAG9O00559 213 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 SMAD6O43541 496 aaKnown RBP18.88■□□□□ 0.61
POLR1E-203ENST00000442009 FZD6O60353 706 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 GSRP00390 522 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 HLA-FP30511 346 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 SERPINB4P48594 390 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 ARSDP51689 593 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 SLC20A2Q08357 652 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 TRAF2Q12933 501 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 CTBP1Q13363 440 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 SEPT7Q16181 437 aaKnown RBP18.88■□□□□ 0.61
POLR1E-203ENST00000442009 UGP2Q16851 508 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 INSCQ1MX18 579 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 PPM1JQ5JR12 505 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 C2orf16Q68DN1 1984 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 ASTLQ6HA08 431 aaPredicted RBP18.88■□□□□ 0.61
POLR1E-203ENST00000442009 CGB2Q6NT52 195 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 C6orf89Q6UWU4 347 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 ITFG1Q8TB96 612 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 PTPRN2Q92932 1015 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 IRF7Q92985 503 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 FAM167BQ9BTA0 163 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 LINC00597Q9H2U6 94 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 TLE6Q9H808 572 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.88■□□□□ 0.61
POLR1E-203ENST00000442009 TBC1D14Q9P2M4 693 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 DCDC2Q9UHG0 476 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 EMCNQ9ULC0 261 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 PCDHGC4Q9Y5F7 938 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 SPO11Q9Y5K1 396 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 SNX3O60493 162 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 ZNF821O75541 412 aaPredicted RBP18.88■□□□□ 0.61
POLR1E-203ENST00000442009 TOP3BO95985 862 aaKnown RBP18.88■□□□□ 0.61
POLR1E-203ENST00000442009 PRKCGP05129 697 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 TYK2P29597 1187 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 SLC1A2P43004 574 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 CSNK1DP48730 415 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 SERPINB8P50452 374 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 RHOAP61586 193 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 GRM3Q14832 879 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 ELMSAN1Q6PJG2 1045 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 KYAT3Q6YP21 454 aaKnown RBP18.88■□□□□ 0.61
POLR1E-203ENST00000442009 GALNT7Q86SF2 657 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 CLEC14AQ86T13 490 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 SRLQ86TD4 932 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 ADGRG2Q8IZP9 1017 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 KIAA1958Q8N8K9 716 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 VN1R2Q8NFZ6 395 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 VOPP1Q96AW1 172 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 NSRP1Q9H0G5 558 aaKnown RBP18.88■□□□□ 0.61
POLR1E-203ENST00000442009 MFSD1Q9H3U5 465 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 FBXO5Q9UKT4 447 aa18.88■□□□□ 0.61
POLR1E-203ENST00000442009 MRPS23Q9Y3D9 190 aaKnown RBP18.88■□□□□ 0.61
POLR1E-203ENST00000442009 ABCG1P45844 678 aa18.87■□□□□ 0.61
POLR1E-203ENST00000442009 POLD2P49005 469 aa18.87■□□□□ 0.61
POLR1E-203ENST00000442009 MPP1Q00013 466 aa18.87■□□□□ 0.61
POLR1E-203ENST00000442009 THOC5Q13769 683 aaKnown RBP18.87■□□□□ 0.61
POLR1E-203ENST00000442009 CBX2Q14781 532 aaPredicted RBP18.87■□□□□ 0.61
POLR1E-203ENST00000442009 MICALCLQ6ZW33 695 aa18.87■□□□□ 0.61
POLR1E-203ENST00000442009 CMC1Q7Z7K0 106 aa18.87■□□□□ 0.61
POLR1E-203ENST00000442009 C12orf76Q8N812 135 aaPredicted RBP18.87■□□□□ 0.61
POLR1E-203ENST00000442009 BLOC1S5Q8TDH9 187 aa18.87■□□□□ 0.61
POLR1E-203ENST00000442009 LRRC8CQ8TDW0 803 aa18.87■□□□□ 0.61
POLR1E-203ENST00000442009 SMG7Q92540 1137 aaKnown RBP18.87■□□□□ 0.61
POLR1E-203ENST00000442009 HDAC10Q969S8 669 aa18.87■□□□□ 0.61
POLR1E-203ENST00000442009 OTUB2Q96DC9 234 aa18.87■□□□□ 0.61
POLR1E-203ENST00000442009 LRRC3BQ96PB8 259 aa18.87■□□□□ 0.61
POLR1E-203ENST00000442009 ELAC2Q9BQ52 826 aaKnown RBP18.87■□□□□ 0.61
POLR1E-203ENST00000442009 IQCGQ9H095 443 aaKnown RBP18.87■□□□□ 0.61
POLR1E-203ENST00000442009 SPHK2Q9NRA0 654 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms