RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 TBCEQ15813 527 aaPredicted RBP5.09□□□□□ -1.59
PFDN4-202ENST00000441080 FSCBQ5H9T9 825 aa5.09□□□□□ -1.59
PFDN4-202ENST00000441080 FNBP1LQ5T0N5 605 aa5.09□□□□□ -1.59
PFDN4-202ENST00000441080 AWAT2Q6E213 333 aa5.09□□□□□ -1.59
PFDN4-202ENST00000441080 CPLX4Q7Z7G2 160 aa5.09□□□□□ -1.59
PFDN4-202ENST00000441080 TDRPQ86YL5 185 aa5.09□□□□□ -1.59
PFDN4-202ENST00000441080 SFTPA2Q8IWL1 248 aa5.09□□□□□ -1.59
PFDN4-202ENST00000441080 DHX40Q8IX18 779 aaKnown RBP5.09□□□□□ -1.59
PFDN4-202ENST00000441080 MB21D2Q8IYB1 491 aaPredicted RBP5.09□□□□□ -1.59
PFDN4-202ENST00000441080 PARP16Q8N5Y8 322 aa5.09□□□□□ -1.59
PFDN4-202ENST00000441080 KCNG4Q8TDN1 519 aa5.09□□□□□ -1.59
PFDN4-202ENST00000441080 SF3B5Q9BWJ5 86 aaKnown RBP5.09□□□□□ -1.59
PFDN4-202ENST00000441080 MAF1Q9H063 256 aa5.09□□□□□ -1.59
PFDN4-202ENST00000441080 RANBP17Q9H2T7 1088 aaKnown RBP5.09□□□□□ -1.59
PFDN4-202ENST00000441080 ORC3Q9UBD5 711 aaPredicted RBP5.09□□□□□ -1.59
PFDN4-202ENST00000441080 SCINQ9Y6U3 715 aa5.09□□□□□ -1.59
PFDN4-202ENST00000441080 A0A1B0GVT2 93 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 FAM90A10PA6NDY2 464 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 NPIPB15A6NHN6 443 aaPredicted RBP5.08□□□□□ -1.6
PFDN4-202ENST00000441080 LRRC53A6NM62 1247 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 NPIPB11E5RHQ5 1161 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 SNAP23O00161 211 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 BCAT2O15382 392 aaPredicted RBP5.08□□□□□ -1.6
PFDN4-202ENST00000441080 MTA2O94776 668 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 RGS11O94810 467 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 MT-CYBP00156 380 aaPredicted RBP5.08□□□□□ -1.6
PFDN4-202ENST00000441080 SPARCP09486 303 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 HSPA1AP0DMV8 641 aaKnown RBP5.08□□□□□ -1.6
PFDN4-202ENST00000441080 HSPA1BP0DMV9 641 aaKnown RBP5.08□□□□□ -1.6
PFDN4-202ENST00000441080 NAGAP17050 411 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 LMO1P25800 156 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 CDC25AP30304 524 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 PGGT1BP53609 377 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 RARSP54136 660 aaKnown RBP5.08□□□□□ -1.6
PFDN4-202ENST00000441080 GEMIN4P57678 1058 aaKnown RBP5.08□□□□□ -1.6
PFDN4-202ENST00000441080 GRIK3Q13003 919 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 GPS2Q13227 327 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 ITGADQ13349 1161 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 DCTN2Q13561 401 aaKnown RBP5.08□□□□□ -1.6
PFDN4-202ENST00000441080 HNF4GQ14541 408 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 GSTA3Q16772 222 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 SOWAHAQ2M3V2 549 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 CDC73Q6P1J9 531 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 ZNF549Q6P9A3 640 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 NOXA1Q86UR1 476 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 ETNPPLQ8TBG4 499 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 NSMCE1Q8WV22 266 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 PIP5K1AQ99755 562 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 GLIS2Q9BZE0 524 aaPredicted RBP5.08□□□□□ -1.6
PFDN4-202ENST00000441080 BRF2Q9HAW0 419 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 BPIFA1Q9NP55 256 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 SMYD2Q9NRG4 433 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 CYSLTR2Q9NS75 346 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 TMEM51Q9NW97 253 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 HIF1ANQ9NWT6 349 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 IL36RNQ9UBH0 155 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 PTGDR2Q9Y5Y4 395 aa5.08□□□□□ -1.6
PFDN4-202ENST00000441080 OR6C75A6NL08 312 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 INAFM1C9JVW0 142 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 IFNL4K9M1U5 179 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 ASAP2O43150 1006 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 KLK8O60259 260 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 SEC14L2O76054 403 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 SEC31AO94979 1220 aaKnown RBP5.07□□□□□ -1.6
PFDN4-202ENST00000441080 OAZ2O95190 189 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 CLEC3BP05452 202 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 CHMP24386 653 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 RGS2P41220 211 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 POLGP54098 1239 aaPredicted RBP5.07□□□□□ -1.6
PFDN4-202ENST00000441080 RPL7AP62424 266 aaKnown RBP5.07□□□□□ -1.6
PFDN4-202ENST00000441080 ST3GAL1Q11201 340 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 MYBPC2Q14324 1141 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 KRT32Q14532 448 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 TCTN1Q2MV58 587 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 TMTC3Q6ZXV5 915 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 CCDC105Q8IYK2 499 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 PELI3Q8N2H9 469 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 ZCCHC9Q8N567 271 aaKnown RBP5.07□□□□□ -1.6
PFDN4-202ENST00000441080 SNAPC3Q92966 411 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 FBXL8Q96CD0 374 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 DCLK3Q9C098 648 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 PRKRIP1Q9H875 184 aaPredicted RBP5.07□□□□□ -1.6
PFDN4-202ENST00000441080 MRPL44Q9H9J2 332 aaKnown RBP5.07□□□□□ -1.6
PFDN4-202ENST00000441080 CLK4Q9HAZ1 481 aaKnown RBP5.07□□□□□ -1.6
PFDN4-202ENST00000441080 MKLN1Q9UL63 735 aa5.07□□□□□ -1.6
PFDN4-202ENST00000441080 A0A087X0M5 115 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 A0A1B0GX30 115 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 USP17L23D6RBM5 183 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 TAF4O00268 1085 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 TGFB1I1O43294 461 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 ETFAP13804 333 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 HOXD3P31249 432 aaPredicted RBP5.06□□□□□ -1.6
PFDN4-202ENST00000441080 ICAM3P32942 547 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 BSGP35613 385 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 NUDT6P53370 316 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 ADORA2A-AS1P86434 159 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 CTTNQ14247 550 aaKnown RBP5.06□□□□□ -1.6
PFDN4-202ENST00000441080 HAUS3Q68CZ6 603 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 LCTLQ6UWM7 567 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms