RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 HTR1BP28222 390 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 HOXA10P31260 410 aaPredicted RBP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 NSUN2Q08J23 767 aaKnown RBP eCLIP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 SAMD4BQ5PRF9 694 aaKnown RBP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 CATSPEREQ5SY80 951 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 OR7A2PQ8NGA2 310 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 LGMNQ99538 433 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 TBC1D13Q9NVG8 400 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 PARNO95453 639 aaKnown RBP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 ASNSP08243 561 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 DDX5P17844 614 aaKnown RBP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 NAMPTP43490 491 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 CCT8P50990 548 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 CYBRD1Q53TN4 286 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 HEATR6Q6AI08 1181 aaKnown RBP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF773Q6PK81 442 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 CLEC4FQ8N1N0 589 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 DNAAF3Q8N9W5 541 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 CCNYQ8ND76 341 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 CHID1Q9BWS9 393 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 ALOXE3Q9BYJ1 711 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 IRF2BPLQ9H1B7 796 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 VRTNQ9H8Y1 702 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 PTPRHQ9HD43 1115 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 FAM49BQ9NUQ9 324 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 ADPRHL2Q9NX46 363 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 GIMAP2Q9UG22 337 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 FBXO9Q9UK97 447 aaPredicted RBP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 IRS2Q9Y4H2 1338 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 NR5A2O00482 541 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 SNX2O60749 519 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 TGFBR1P36897 503 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 POU5F1BQ06416 359 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 VAC14Q08AM6 782 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 MTERF2Q49AM1 385 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 TBPL2Q6SJ96 375 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 SCML4Q8N228 414 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 NIPA2Q8N8Q9 360 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 NDNFQ8TB73 568 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 VPS33AQ96AX1 596 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 RIT2Q99578 217 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 ASNSD1Q9NWL6 643 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 DPP3Q9NY33 737 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 NYAP2Q9P242 653 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 FBXO40Q9UH90 709 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 NAV1Q8NEY1 1877 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 SCN7AQ01118 1682 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 ROBO1Q9Y6N7 1651 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 COL22A1Q8NFW1 1626 aaPredicted RBP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 LINC00854A0A1B0GVQ3 168 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 UBDO15205 165 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 NUAK1O60285 661 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 SEC24AO95486 1093 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 UGT2B4P06133 528 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 PRKCAP17252 672 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 YWHAQP27348 245 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 GTF2E2P29084 291 aaKnown RBP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 SPRP35270 261 aaPredicted RBP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 TNFSF9P41273 254 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 NUMBP49757 651 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 MTMR1Q13613 665 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 KIF19Q2TAC6 998 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 HDAC11Q96DB2 347 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 CERS2Q96G23 380 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 MAGEE1Q9HCI5 957 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 PRDM8Q9NQV8 689 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 GABBR1Q9UBS5 961 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 SEPT9Q9UHD8 586 aaPredicted RBP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 NHSL1Q5SYE7 1610 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 MEN1O00255 615 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 HOXC11O43248 304 aaPredicted RBP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 CRYZL1O95825 349 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 TPH1P17752 444 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 FSHRP23945 695 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 ATXN1P54253 815 aaKnown RBP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 INPP5AQ14642 412 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 TMTC4Q5T4D3 741 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 SIGIRRQ6IA17 410 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 BPHLQ86WA6 291 aaPredicted RBP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 GALNT13Q8IUC8 556 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 CERS5Q8N5B7 392 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 MFSD2AQ8NA29 543 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 ATL1Q8WXF7 558 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 SEZ6LQ9BYH1 1024 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 EVLQ9UI08 416 aaPredicted RBP7.51□□□□□ -1.21
CPSF6-202ENST00000435070 SDHDO14521 159 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 TEX28O15482 410 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 SNRPB2P08579 225 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 SPNP16150 400 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 NIPAL4Q0D2K0 466 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 GRSF1Q12849 480 aaKnown RBP eCLIP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 GRAPQ13588 217 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 USP10Q14694 798 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 MEP1AQ16819 746 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 STXBP5Q5T5C0 1151 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 TAS1R3Q7RTX0 852 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 CATSPER4Q7RTX7 472 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 STK32CQ86UX6 486 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 FAM20CQ8IXL6 584 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 SYTL1Q8IYJ3 562 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms