RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 HNRNPLP14866 589 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 NSUN2Q08J23 767 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 HERC3Q15034 1050 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 EML3Q32P44 896 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 NADK2Q4G0N4 442 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 INTS6LQ5JSJ4 861 aaKnown RBP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 OVOS1Q6IE37 1185 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 KDELC2Q7Z4H8 507 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 TMEM126BQ8IUX1 230 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 PCDH20Q8N6Y1 951 aaKnown RBP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 EME1Q96AY2 570 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 POMKQ9H5K3 350 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 TRPC5OSA6NMA1 111 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 FAM58BPP0C7Q3 252 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 ODC1P11926 461 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 SLC12A2P55011 1212 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 PCID2Q5JVF3 399 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 PKN3Q6P5Z2 889 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 PTAR1Q7Z6K3 402 aaPredicted RBP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 CNTD1Q8N815 330 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 CEP70Q8NHQ1 597 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 DTNBP1Q96EV8 351 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 SIK2Q9H0K1 926 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 MRPL46Q9H2W6 279 aaKnown RBP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 EPB41L1Q9H4G0 881 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 AAR2Q9Y312 384 aaKnown RBP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 KIAA0100Q14667 2235 aaKnown RBP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 TCAF2A6NFQ2 919 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 KCNU1A8MYU2 1149 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 COL6A2P12110 1019 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 HOXD10P28358 340 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 PGFP49763 221 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 CSRP3P50461 194 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 MYBPC1Q00872 1141 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 DSC3Q14574 896 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 NRF1Q16656 503 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 TRIM71Q2Q1W2 868 aaKnown RBP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 ESRP1Q6NXG1 681 aaKnown RBP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 CD300LGQ6UXG3 332 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 ARHGAP36Q6ZRI8 547 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 LCA5Q86VQ0 697 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 RNF135Q8IUD6 432 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 METTL25Q8N6Q8 603 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 KDM1BQ8NB78 822 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 PPHLN1Q8NEY8 458 aaKnown RBP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 ZNF296Q8WUU4 475 aaPredicted RBP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 ZFRQ96KR1 1074 aaKnown RBP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 TBL1YQ9BQ87 522 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 MRPS26Q9BYN8 205 aaKnown RBP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 SEMA6AQ9H2E6 1030 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 CYP4F12Q9HCS2 524 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 CNGB3Q9NQW8 809 aa10.63□□□□□ -0.71
SMPD4-206ENST00000433118 ABI2Q9NYB9 513 aaPredicted RBP10.63□□□□□ -0.71
SMPD4-206ENST00000433118 NEMP2A6NFY4 417 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 TARM1B6A8C7 271 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 HSPA13P48723 471 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 CDKL1Q00532 357 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 PDAP1Q13442 181 aaKnown RBP10.62□□□□□ -0.71
SMPD4-206ENST00000433118 TUSC3Q13454 348 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 LRRC23Q53EV4 343 aaPredicted RBP10.62□□□□□ -0.71
SMPD4-206ENST00000433118 CLLU1OSQ5K130 101 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 ZNF470Q6ECI4 717 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 KLHDC10Q6PID8 442 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 GLB1LQ6UWU2 654 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 TRIM67Q6ZTA4 783 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 MRPL10Q7Z7H8 261 aaKnown RBP10.62□□□□□ -0.71
SMPD4-206ENST00000433118 METTL23Q86XA0 190 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 MFSD6LQ8IWD5 586 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 AHI1Q8N157 1196 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 TXNDC5Q8NBS9 432 aaKnown RBP10.62□□□□□ -0.71
SMPD4-206ENST00000433118 B4GALNT2Q8NHY0 566 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 LINC01599Q8WXQ3 324 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 RSPH1Q8WYR4 309 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 ATP6V1E2Q96A05 226 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 FICDQ9BVA6 458 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 OCEL1Q9H607 264 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 TRPC7Q9HCX4 862 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 HMX1Q9NP08 348 aaPredicted RBP10.62□□□□□ -0.71
SMPD4-206ENST00000433118 PRSS51A0A1B0GVH4 220 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 TRIM38O00635 465 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 VILLO15195 856 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 PSMD3O43242 534 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 ZNF623O75123 536 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 RNASEH2AO75792 299 aaKnown RBP10.62□□□□□ -0.71
SMPD4-206ENST00000433118 SOAT2O75908 522 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 F9P00740 461 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 DNAJB2P25686 324 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 PCSK1P29120 753 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 GRIK1P39086 918 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 SLC1A2P43004 574 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 VEGFBP49765 207 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 PSME3P61289 254 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 SEPT6Q14141 434 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 TSTD2Q5T7W7 516 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 IL23RQ5VWK5 629 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 LHX8Q68G74 356 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 PAOXQ6QHF9 649 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 TICAM1Q8IUC6 712 aa10.62□□□□□ -0.71
SMPD4-206ENST00000433118 DNAJC1Q96KC8 554 aaKnown RBP10.62□□□□□ -0.71
SMPD4-206ENST00000433118 FSD1LQ9BXM9 530 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms