RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 RAP1GDS1P52306 607 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 TMEM207Q6UWW9 146 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 PTCD2Q8WV60 388 aaKnown RBP14.06□□□□□ -0.16
RBM39-212ENST00000429968 ANKRD49Q8WVL7 239 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 DRC3Q9H069 523 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 MMADHCQ9H3L0 296 aaPredicted RBP14.06□□□□□ -0.16
RBM39-212ENST00000429968 STN1Q9H668 368 aaKnown RBP14.06□□□□□ -0.16
RBM39-212ENST00000429968 PDFQ9HBH1 243 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 TNFRSF12AQ9NP84 129 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 NSMCE4AQ9NXX6 385 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 RPL26L1Q9UNX3 145 aaKnown RBP14.06□□□□□ -0.16
RBM39-212ENST00000429968 PHF24Q9UPV7 400 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 ACOT9Q9Y305 439 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 LOC100653049A0A140TA62 436 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 TMEM114B3SHH9 223 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 LDB2O43679 373 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 RAMP2O60895 175 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 KRT34O76011 436 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 TM7SF2O76062 418 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 PSMG1O95456 288 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 PRSS56P0CW18 603 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 TACR2P21452 398 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 EPHA3P29320 983 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 GALNT3Q14435 633 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 FRMD7Q6ZUT3 714 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 TMC7Q7Z402 723 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 LRRC49Q8IUZ0 686 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 SCUBE1Q8IWY4 988 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 OR7D4Q8NG98 312 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 SEMA3CQ99985 751 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 ELAC1Q9H777 363 aaKnown RBP14.06□□□□□ -0.16
RBM39-212ENST00000429968 VPS45Q9NRW7 570 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 FNIP2Q9P278 1114 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 ARL5AQ9Y689 179 aa14.06□□□□□ -0.16
RBM39-212ENST00000429968 MROH6A6NGR9 719 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 MATN2O00339 956 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 MAGEC1O60732 1142 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 RTN3O95197 1032 aaPredicted RBP14.05□□□□□ -0.16
RBM39-212ENST00000429968 KLHL2O95198 593 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 HOXD9P28356 352 aaPredicted RBP14.05□□□□□ -0.16
RBM39-212ENST00000429968 HADHAP40939 763 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 RGRP47804 291 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 CSHL1Q14406 222 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 SEMA3AQ14563 771 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 LBRQ14739 615 aaKnown RBP14.05□□□□□ -0.16
RBM39-212ENST00000429968 TMEM198Q66K66 360 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 RIPOR1Q6ZS17 1223 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 PIM3Q86V86 326 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 RNF135Q8IUD6 432 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 LGI2Q8N0V4 545 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 SPPL2BQ8TCT7 592 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 HDAC10Q969S8 669 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 SPATA17Q96L03 361 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 MARK4Q96L34 752 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 NUF2Q9BZD4 464 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.05□□□□□ -0.161e-15■□□□□ 10.2
RBM39-212ENST00000429968 DCLRE1BQ9H816 532 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 G3BP2Q9UN86 482 aaKnown RBP14.05□□□□□ -0.16
RBM39-212ENST00000429968 ANKRD12Q6UB98 2062 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 PLXNA4Q9HCM2 1894 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 LOC285095A0A1B0GVY8 99 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 HEATR9A2RTY3 570 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 EIF4E1BA6NMX2 242 aaKnown RBP14.05□□□□□ -0.16
RBM39-212ENST00000429968 SCAMP3O14828 347 aaKnown RBP14.05□□□□□ -0.16
RBM39-212ENST00000429968 KLKB1P03952 638 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 CDKN2DP55273 166 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 CCL23P55773 120 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 RPS24P62847 133 aaKnown RBP14.05□□□□□ -0.16
RBM39-212ENST00000429968 MXRA7P84157 204 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 NSUN2Q08J23 767 aaKnown RBP eCLIP14.05□□□□□ -0.16
RBM39-212ENST00000429968 UGP2Q16851 508 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 PPM1LQ5SGD2 360 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 CILP2Q8IUL8 1156 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 NPAS4Q8IUM7 802 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 FBXO22Q8NEZ5 403 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 FATE1Q969F0 183 aa14.05□□□□□ -0.16
RBM39-212ENST00000429968 PRICKLE1Q96MT3 831 aaPredicted RBP14.05□□□□□ -0.16
RBM39-212ENST00000429968 UBE2OQ9C0C9 1292 aaKnown RBP14.05□□□□□ -0.16
RBM39-212ENST00000429968 OBSL1O75147 1896 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 H3BNC9 293 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 PRAMEF11O60813 436 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 PQBP1O60828 265 aaKnown RBP14.04□□□□□ -0.16
RBM39-212ENST00000429968 PDE5AO76074 875 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 SEC24AO95486 1093 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 ATP5BP06576 529 aaKnown RBP14.04□□□□□ -0.16
RBM39-212ENST00000429968 HOXD10P28358 340 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 KCNC1P48547 511 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 TIAL1Q01085 375 aaKnown RBP eCLIP14.04□□□□□ -0.161e-6■■■□□ 17.9
RBM39-212ENST00000429968 IL10RBQ08334 325 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 NAA25Q14CX7 972 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 TBCCQ15814 346 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 DEFB115Q30KQ5 88 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 LSM12Q3MHD2 195 aaKnown RBP14.04□□□□□ -0.16
RBM39-212ENST00000429968 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.04□□□□□ -0.161e-8■■■■□ 22
RBM39-212ENST00000429968 TMCO2Q7Z6W1 182 aaPredicted RBP14.04□□□□□ -0.16
RBM39-212ENST00000429968 C11orf96Q7Z7L8 435 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 OR13C4Q8NGS5 318 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 N4BP2L2Q92802 583 aaPredicted RBP14.04□□□□□ -0.16
RBM39-212ENST00000429968 EXOC2Q96KP1 924 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 TBATAQ96M53 351 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms