RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 FUT11Q495W5 492 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 EOGTQ5NDL2 527 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 MRPL43Q8N983 215 aaKnown RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 LMO3Q8TAP4 145 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 PRCCQ92733 491 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 MYOCQ99972 504 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 CTNNAL1Q9UBT7 734 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 NDUFB5O43674 189 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 CDKN2BP42772 138 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 PRKAA1Q13131 559 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.02□□□□□ -0.32
PTCH1-207ENST00000429896 APTXQ7Z2E3 356 aaKnown RBP13.02□□□□□ -0.32
PTCH1-207ENST00000429896 SETD3Q86TU7 594 aaPredicted RBP13.02□□□□□ -0.32
PTCH1-207ENST00000429896 FEM1CQ96JP0 617 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 RPL10LQ96L21 214 aaKnown RBP13.02□□□□□ -0.32
PTCH1-207ENST00000429896 PAFAH2Q99487 392 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 KDM4CQ9H3R0 1056 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 ZDHHC4Q9NPG8 344 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 DCDC2Q9UHG0 476 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 ZNHIT2Q9UHR6 403 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 RAB21Q9UL25 225 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 HS3ST4Q9Y661 456 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 LPOP22079 712 aaPredicted RBP13.02□□□□□ -0.32
PTCH1-207ENST00000429896 KELP23276 732 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 FMO4P31512 558 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 WNT7BP56706 349 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 TAS1R1Q7RTX1 841 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 C12orf50Q8NA57 414 aaPredicted RBP13.02□□□□□ -0.32
PTCH1-207ENST00000429896 ACDQ96AP0 544 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 LRRC39Q96DD0 335 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 WDR6Q9NNW5 1121 aaKnown RBP13.02□□□□□ -0.32
PTCH1-207ENST00000429896 TBC1D30Q9Y2I9 924 aa13.02□□□□□ -0.32
PTCH1-207ENST00000429896 MYO5AQ9Y4I1 1855 aaKnown RBP13.02□□□□□ -0.32
PTCH1-207ENST00000429896 TCP11X1B4DZS4 312 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 TYRP14679 529 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 PEX6Q13608 980 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 GALNT4Q8N4A0 578 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 CPNE1Q99829 537 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 OSBPL1AQ9BXW6 950 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 NFKBIL1Q9UBC1 381 aaPredicted RBP13.02□□□□□ -0.33
PTCH1-207ENST00000429896 ZNF229Q9UJW7 825 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 STARD13Q9Y3M8 1113 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 BUD23O43709 281 aaKnown RBP13.02□□□□□ -0.33
PTCH1-207ENST00000429896 GBE1Q04446 702 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 USP4Q13107 963 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 RTL10Q7L3V2 364 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 SERPINB12Q96P63 405 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 H0YGN5 161 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 FKBP9O95302 570 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 CD48P09326 243 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 NAB1Q13506 487 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 CA9Q16790 459 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 CARD16Q5EG05 197 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 FKBP9P1Q75LS8 142 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 TMEM130Q8N3G9 435 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 ALG3Q92685 438 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 SERAC1Q96JX3 654 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 TAS2R13Q9NYV9 303 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 PCYOX1Q9UHG3 505 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 GNPTGQ9UJJ9 305 aa13.02□□□□□ -0.33
PTCH1-207ENST00000429896 TDRKHQ9Y2W6 561 aaKnown RBP13.02□□□□□ -0.33
PTCH1-207ENST00000429896 ILVBLA1L0T0 632 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 F8W810 466 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 HSD17B3P37058 310 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 AP2B1P63010 937 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 RFTN1Q14699 578 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-207ENST00000429896 DLG2Q15700 870 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 DPYSL2Q16555 572 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 LRRC23Q53EV4 343 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-207ENST00000429896 C10orf53Q8N6V4 93 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 SGF29Q96ES7 293 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 SLC39A8Q9C0K1 460 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 CHKBQ9Y259 395 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 LINC01553A4QN01 128 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 GLRA3O75311 464 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 GRK3P35626 688 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 HADHBP55084 474 aaKnown RBP13.01□□□□□ -0.33
PTCH1-207ENST00000429896 ITGA9Q13797 1035 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 ZCCHC9Q8N567 271 aaKnown RBP13.01□□□□□ -0.33
PTCH1-207ENST00000429896 ST13P5Q8NFI4 369 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-207ENST00000429896 ACOT9Q9Y305 439 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 ZNF840PA6NDX5 716 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 NME5P56597 212 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 ALKAL1Q6UXT8 129 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 CHMP1BQ7LBR1 199 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 EPN3Q9H201 632 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 HCSTQ9UBK5 93 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 HEPACAM2A8MVW5 462 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 AKAP10O43572 662 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 MAN1A2O60476 641 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 BEST1O76090 585 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 CDH5P33151 784 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-207ENST00000429896 MDH1P40925 334 aaKnown RBP13.01□□□□□ -0.33
PTCH1-207ENST00000429896 WASHC5Q12768 1159 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 ALFQ53S48 1182 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 FAM162AQ96A26 154 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 DDX28Q9NUL7 540 aaKnown RBP13.01□□□□□ -0.33
PTCH1-207ENST00000429896 UTP6Q9NYH9 597 aaKnown RBP13.01□□□□□ -0.33
PTCH1-207ENST00000429896 GTF2A1LQ9UNN4 478 aa13.01□□□□□ -0.33
PTCH1-207ENST00000429896 ZNF839A8K0R7 811 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms