RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SPIBQ01892 262 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 NT5DC1Q5TFE4 455 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 NEPROQ6NW34 567 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 DNAJC14Q6Y2X3 702 aaPredicted RBP14.53□□□□□ -0.08
PTPN13-203ENST00000427191 MAN2B2Q9Y2E5 1009 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 ADSLP30566 484 aaPredicted RBP14.53□□□□□ -0.08
PTPN13-203ENST00000427191 TMEM44Q2T9K0 475 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 QSOX2Q6ZRP7 698 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 TXNRD3Q86VQ6 643 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 ERMAPQ96PL5 475 aaPredicted RBP14.53□□□□□ -0.08
PTPN13-203ENST00000427191 AIFM2Q9BRQ8 373 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 ATP13A3Q9H7F0 1226 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 SLC35C2Q9NQQ7 365 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 CIDEBQ9UHD4 219 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 FAM50BQ9Y247 325 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 METTL18O95568 372 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 OAZ1P54368 228 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 KCTD21Q4G0X4 260 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 UROC1Q96N76 676 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 C3orf14Q9HBI5 128 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 GNEQ9Y223 722 aaKnown RBP14.53□□□□□ -0.08
PTPN13-203ENST00000427191 OR10H3O60404 316 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 ANPEPP15144 967 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 DRG2P55039 364 aaKnown RBP14.53□□□□□ -0.08
PTPN13-203ENST00000427191 IRF8Q02556 426 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 LAMTOR4Q0VGL1 99 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 APOL2Q9BQE5 337 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 MYOZ2Q9NPC6 264 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 GRIP1Q9Y3R0 1128 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 OR10H1Q9Y4A9 318 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 PITPNAQ00169 270 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 FAM189A2Q15884 450 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 GPAT3Q53EU6 434 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 METTL7BQ6UX53 244 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 PLCZ1Q86YW0 608 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 HPSEQ9Y251 543 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 RBMXL2O75526 392 aaKnown RBP14.52□□□□□ -0.08
PTPN13-203ENST00000427191 ITGA3P26006 1051 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 ASMTP46597 345 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 BEND5Q7L4P6 421 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 KBTBD2Q8IY47 623 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 KLHL23Q8NBE8 558 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 FBXO10Q9UK96 956 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 KLHL35Q6PF15 583 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 MCFD2Q8NI22 146 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 SLC9A6Q92581 669 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 C18orf25Q96B23 403 aaPredicted RBP14.52□□□□□ -0.08
PTPN13-203ENST00000427191 MED28Q9H204 178 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 TRPV5Q9NQA5 729 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 TOR4AQ9NXH8 423 aa14.52□□□□□ -0.08
PTPN13-203ENST00000427191 DDX43Q9NXZ2 648 aaKnown RBP14.52□□□□□ -0.08
PTPN13-203ENST00000427191 RPA3P35244 121 aaPredicted RBP14.52□□□□□ -0.09
PTPN13-203ENST00000427191 DPYSL3Q14195 570 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 SPATA19Q7Z5L4 167 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 FBXO30Q8TB52 745 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 RSL1D1O76021 490 aaKnown RBP14.52□□□□□ -0.09
PTPN13-203ENST00000427191 RAB10P61026 200 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 PIK3R6Q5UE93 754 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 PTCHD4Q6ZW05 846 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 NDOR1Q9UHB4 597 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 SLIT1O75093 1534 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.52□□□□□ -0.09
PTPN13-203ENST00000427191 AKAP8O43823 692 aaKnown RBP14.52□□□□□ -0.09
PTPN13-203ENST00000427191 PSMD5Q16401 504 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 PGBD2Q6P3X8 592 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 FBXL19Q6PCT2 694 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 SPAG16Q8N0X2 631 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 TMCO6Q96DC7 493 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 ZNF354BQ96LW1 612 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 MYH6P13533 1939 aa14.52□□□□□ -0.09
PTPN13-203ENST00000427191 MICAL2O94851 1124 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 EPORP19235 508 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 LCN1P1Q5VSP4 162 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 FAM131AQ6UXB0 335 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 POU5F2Q8N7G0 328 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 ZKSCAN4Q969J2 545 aaPredicted RBP14.51□□□□□ -0.09
PTPN13-203ENST00000427191 MRPS7Q9Y2R9 242 aaKnown RBP14.51□□□□□ -0.09
PTPN13-203ENST00000427191 MBD5Q9P267 1494 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 TMEM192Q8IY95 271 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 ADGRG2Q8IZP9 1017 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 SRFBP1Q8NEF9 429 aaKnown RBP14.51□□□□□ -0.09
PTPN13-203ENST00000427191 CERS2Q96G23 380 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 OSGEPQ9NPF4 335 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 PSMD13Q9UNM6 376 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 SPATA31A6Q5VVP1 1343 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 FAM205CA6NFA0 338 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 CASKO14936 926 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 HDAC3O15379 428 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 ZNF12P17014 697 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 SLC27A1Q6PCB7 646 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 BEND7Q8N7W2 519 aaPredicted RBP14.51□□□□□ -0.09
PTPN13-203ENST00000427191 FAM136AQ96C01 138 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 KIAA1683Q9H0B3 1180 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 NOL11Q9H8H0 719 aaKnown RBP14.51□□□□□ -0.09
PTPN13-203ENST00000427191 GTPBP1O00178 669 aaKnown RBP14.51□□□□□ -0.09
PTPN13-203ENST00000427191 ZNF662Q6ZS27 426 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 HPS6Q86YV9 775 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 ZNF606Q8WXB4 792 aa14.51□□□□□ -0.09
PTPN13-203ENST00000427191 AGO4Q9HCK5 861 aaKnown RBP14.51□□□□□ -0.09
PTPN13-203ENST00000427191 GULP1Q9UBP9 304 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms