RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 KLF15Q9UIH9 416 aa18.51■□□□□ 0.55
SMARCAL1-205ENST00000425815 CEP295Q9C0D2 2601 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 AKR1B15C9JRZ8 316 aaPredicted RBP18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 TRIM38O00635 465 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 LDOC1O95751 146 aaPredicted RBP18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 CR2P20023 1033 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 DGKAP23743 735 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 SCNN1BP51168 640 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 SUOXP51687 545 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 SEMG2Q02383 582 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 KRT81Q14533 505 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 TSR1Q2NL82 804 aaKnown RBP18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 ZNF542PQ5EBM4 170 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 TMCO4Q5TGY1 634 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 BRAT1Q6PJG6 821 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 TP53I13Q8NBR0 393 aaPredicted RBP18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 CCDC42Q96M95 316 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 WRAP53Q9BUR4 548 aaKnown RBP18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 RBSNQ9H1K0 784 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 FTSJ1Q9UET6 329 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 SEPT3Q9UH03 358 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 TPRP12270 2363 aaKnown RBP18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 AKAP13Q12802 2813 aa18.5■□□□□ 0.55
SMARCAL1-205ENST00000425815 SPTY2D1-AS1A0A0U1RR47 76 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 FPGTO14772 594 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 TM7SF2O76062 418 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 PROS1P07225 676 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 TPM1P09493 284 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 MAN1A1P33908 653 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 IGFALSP35858 605 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 RABIFP47224 123 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 DNAJC3Q13217 504 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 MESDQ14696 234 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 PAFAH1B3Q15102 231 aaKnown RBP18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 ANKRD20A8PQ5CZ79 823 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 NCBP2-AS2Q69YL0 99 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 UNQ6494/PRO21346Q6UXR6 183 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 PTAR1Q7Z6K3 402 aaPredicted RBP18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 MARCH9Q86YJ5 346 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 DCP2Q8IU60 420 aaKnown RBP18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 PQLC3Q8N755 202 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 TC2NQ8N9U0 490 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 KCTD6Q8NC69 237 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 DENND6BQ8NEG7 585 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 CXorf40AQ8TE69 158 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 RAPGEF5Q92565 580 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 FAF2Q96CS3 445 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 IFT43Q96FT9 208 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 CNDP2Q96KP4 475 aaKnown RBP18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 ATP13A3Q9H7F0 1226 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 PNMA8BQ9ULN7 279 aaPredicted RBP18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 COQ6Q9Y2Z9 468 aa18.49■□□□□ 0.55
SMARCAL1-205ENST00000425815 ENC1O14682 589 aa18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 PIAS2O75928 621 aa18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 MTA2O94776 668 aa18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 CAPNS1P04632 268 aa18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 GJC1P36383 396 aa18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 RENBPP51606 427 aa18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 BCL2L1Q07817 233 aa18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 EIF2B5Q13144 721 aaKnown RBP18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 WSCD2Q2TBF2 565 aa18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 INAVAQ3KP66 663 aa18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 CCNI2Q6ZMN8 369 aaPredicted RBP18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 TMPRSS7Q7RTY8 843 aa18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 CNGA4Q8IV77 575 aa18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 TEX26Q8N6G2 289 aa18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 TRIM5Q9C035 493 aa18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 NOD2Q9HC29 1040 aa18.48■□□□□ 0.55
SMARCAL1-205ENST00000425815 WDFY3Q8IZQ1 3526 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 TMEM110-MUSTN1A8MSY1 372 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 HTRA2O43464 458 aaPredicted RBP18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 MFSD11O43934 449 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 CSF2P04141 144 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 C6P13671 934 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 GM2AP17900 193 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 XPAP23025 273 aaPredicted RBP18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 SERPINA4P29622 427 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 MMP12P39900 470 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 LIG3P49916 1009 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 ELP6Q0PNE2 266 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 GALNT2Q10471 571 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 SLC10A2Q12908 348 aaPredicted RBP18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 RALGDSQ12967 914 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 PDE1CQ14123 709 aaPredicted RBP18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 IHHQ14623 411 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 PDK2Q15119 407 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 TCEAL1Q15170 157 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 PROX2Q3B8N5 592 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 GAS2L3Q86XJ1 694 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 ATPAF2Q8N5M1 289 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 KDF1Q8NAX2 398 aaPredicted RBP18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 LRRN4Q8WUT4 740 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 NUDCD1Q96RS6 583 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 MGME1Q9BQP7 344 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 ZNF670Q9BS34 389 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 LCMT1Q9UIC8 334 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 ATP8A1Q9Y2Q0 1164 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 PCDHGC4Q9Y5F7 938 aa18.47■□□□□ 0.55
SMARCAL1-205ENST00000425815 C3orf70A6NLC5 250 aaPredicted RBP18.46■□□□□ 0.55
SMARCAL1-205ENST00000425815 SIGLEC6O43699 453 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms