RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 AGBL2Q5U5Z8 902 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 EFL1Q7Z2Z2 1120 aaKnown RBP9.81□□□□□ -0.84
CMSS1-201ENST00000421999 CELF5Q8N6W0 485 aaKnown RBP9.81□□□□□ -0.84
CMSS1-201ENST00000421999 IRF7Q92985 503 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 SYT11Q9BT88 431 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 ZFYVE1Q9HBF4 777 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 NCKIPSDQ9NZQ3 722 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 VPS51Q9UID3 782 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 GJB5O95377 273 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 RHOP08100 348 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 ENO3P13929 434 aaPredicted RBP9.81□□□□□ -0.84
CMSS1-201ENST00000421999 KELP23276 732 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 MTHFRP42898 656 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 EIF2B5Q13144 721 aaKnown RBP9.81□□□□□ -0.84
CMSS1-201ENST00000421999 PPP1R15BQ5SWA1 713 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 VITQ6UXI7 678 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 ZNF598Q86UK7 904 aaKnown RBP9.81□□□□□ -0.84
CMSS1-201ENST00000421999 LMNTD2Q8IXW0 634 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 FBXO39Q8N4B4 442 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 ART4Q93070 314 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 NTAN1Q96AB6 310 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 MANSC1Q9H8J5 431 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 VCX3AQ9NNX9 186 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 VPS45Q9NRW7 570 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 RAD18Q9NS91 495 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 RASSF9O75901 435 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 CPA3P15088 417 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 CES1P23141 567 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 ADRA1DP25100 572 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 IL2P60568 153 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 DSC2Q02487 901 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 OVGP1Q12889 678 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 CDC16Q13042 620 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 PPP4R4Q6NUP7 873 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 FBXL22Q6P050 247 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 LAYNQ6UX15 382 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.81□□□□□ -0.84
CMSS1-201ENST00000421999 RTL3Q8N8U3 475 aaKnown RBP9.81□□□□□ -0.84
CMSS1-201ENST00000421999 GSTCDQ8NEC7 633 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 GRAMD1AQ96CP6 724 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 HMCESQ96FZ2 354 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 PHPT1Q9NRX4 125 aaPredicted RBP9.81□□□□□ -0.84
CMSS1-201ENST00000421999 SOHLH2Q9NX45 425 aa9.81□□□□□ -0.84
CMSS1-201ENST00000421999 TRBV23OR9-2A0A075B6M9 112 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 LRRC72A6NJI9 287 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 ANKRD65E5RJM6 399 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 PSMD12O00232 456 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 CNTFP26441 200 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 AARSP49588 968 aaKnown RBP eCLIP9.8□□□□□ -0.842e-8■■■■■ 46.4
CMSS1-201ENST00000421999 CACNA2D1P54289 1103 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 ITGA9Q13797 1035 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 KBTBD12Q3ZCT8 623 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 ANKRD33Q7Z3H0 272 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 SPATA21Q7Z572 469 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 PRPF39Q86UA1 669 aaKnown RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 TSTD1Q8NFU3 115 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 GDPD5Q8WTR4 605 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 KLK6Q92876 244 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 LRRC39Q96DD0 335 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 FAR2Q96K12 515 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 HAPLN3Q96S86 360 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 HEPHQ9BQS7 1158 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 SMOC2Q9H3U7 446 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 MTRRQ9UBK8 725 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 SLC24A2Q9UI40 661 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 CDYLQ9Y232 598 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 GRXCR1A8MXD5 290 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 SCAMP1O15126 338 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 POP4O95707 220 aaKnown RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 CNPP09543 421 aaKnown RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 MDH1P40925 334 aaKnown RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 CXCR3P49682 368 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 CCNG1P51959 295 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 MLLT6P55198 1093 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 PRKCQQ04759 706 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 ZNF844Q08AG5 666 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 GRM3Q14832 879 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 LRRC73Q5JTD7 316 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 ATXN7L2Q5T6C5 722 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 CNSTQ6PJW8 725 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 MTSS1LQ765P7 747 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 NLRP14Q86W24 1093 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 SLC44A2Q8IWA5 706 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 OR4K2Q8NGD2 314 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 SLC39A8Q9C0K1 460 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 RASSF4Q9H2L5 321 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 ERVW-1Q9UQF0 538 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 KIAA1217Q5T5P2 1943 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 FAM95CA0A1B0GW59 222 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 MGAT4DA6NG13 374 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 DGKIO75912 1065 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 EIF2S1P05198 315 aaKnown RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 RB1P06400 928 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 SLC35G4P0C7Q5 338 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 MAPKAPK2P49137 400 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 TTPAP49638 278 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 USP46P62068 366 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 SEMG2Q02383 582 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 ELP6Q0PNE2 266 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms