RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CYTH1Q15438 398 aa14.98□□□□□ -0.01
RPS28-201ENST00000417088 TMEM52BQ4KMG9 183 aa14.98□□□□□ -0.01
RPS28-201ENST00000417088 BROXQ5VW32 411 aa14.98□□□□□ -0.01
RPS28-201ENST00000417088 MON1BQ7L1V2 547 aa14.98□□□□□ -0.01
RPS28-201ENST00000417088 UMODL1-AS1Q8N2C9 162 aa14.98□□□□□ -0.01
RPS28-201ENST00000417088 ZNF843Q8N446 348 aa14.98□□□□□ -0.01
RPS28-201ENST00000417088 NAT6Q93015 286 aa14.98□□□□□ -0.01
RPS28-201ENST00000417088 SLC46A1Q96NT5 459 aa14.98□□□□□ -0.01
RPS28-201ENST00000417088 CPEB1Q9BZB8 566 aaKnown RBP14.98□□□□□ -0.01
RPS28-201ENST00000417088 SLC13A1Q9BZW2 595 aa14.98□□□□□ -0.01
RPS28-201ENST00000417088 CPNE5Q9HCH3 593 aa14.98□□□□□ -0.01
RPS28-201ENST00000417088 FANCLQ9NW38 375 aa14.98□□□□□ -0.01
RPS28-201ENST00000417088 FZD10Q9ULW2 581 aa14.98□□□□□ -0.01
RPS28-201ENST00000417088 PMS2P1A4D2B8 440 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 CREB3O43889 395 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 TCEA3O75764 348 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 PIGNO95427 931 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 CELA2BP08218 269 aaPredicted RBP14.97□□□□□ -0.01
RPS28-201ENST00000417088 RBMS1P29558 406 aaKnown RBP14.97□□□□□ -0.01
RPS28-201ENST00000417088 SUOXP51687 545 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 COPB1P53618 953 aaKnown RBP14.97□□□□□ -0.01
RPS28-201ENST00000417088 RPL7AP62424 266 aaKnown RBP14.97□□□□□ -0.01
RPS28-201ENST00000417088 SKOR1P84550 965 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 WSCD2Q2TBF2 565 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 PARP15Q460N3 678 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 ARHGAP40Q5TG30 622 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 EXOC2Q96KP1 924 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 MCEEQ96PE7 176 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 DPH1Q9BZG8 443 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 CATSPERBQ9H7T0 1116 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 PADI4Q9UM07 663 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 SSUH2Q9Y2M2 353 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 COQ6Q9Y2Z9 468 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 PCDHGA8Q9Y5G5 932 aa14.97□□□□□ -0.01
RPS28-201ENST00000417088 TSPAN11A1L157 253 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 ERVH48-1M5A8F1 160 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 FLNBO75369 2602 aaKnown RBP14.96□□□□□ -0.01
RPS28-201ENST00000417088 ZIC2O95409 532 aaPredicted RBP14.96□□□□□ -0.01
RPS28-201ENST00000417088 XPAP23025 273 aaPredicted RBP14.96□□□□□ -0.01
RPS28-201ENST00000417088 PEX5P50542 639 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 HK3P52790 923 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 PDX1P52945 283 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 ELP6Q0PNE2 266 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 ATMQ13315 3056 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 LRRC14Q15048 493 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 PPP1R15BQ5SWA1 713 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 ESRP1Q6NXG1 681 aaKnown RBP14.96□□□□□ -0.01
RPS28-201ENST00000417088 DNAJC24Q6P3W2 148 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 NEK11Q8NG66 645 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 WDR48Q8TAF3 677 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 HCAR2Q8TDS4 363 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 TSACCQ96A04 125 aaPredicted RBP14.96□□□□□ -0.01
RPS28-201ENST00000417088 PCMTD1Q96MG8 357 aaPredicted RBP14.96□□□□□ -0.01
RPS28-201ENST00000417088 AGPAT1Q99943 283 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 NCAPGQ9BPX3 1015 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 CCDC3Q9BQI4 270 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 CNPY3Q9BT09 278 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 PDFQ9HBH1 243 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 PCDH12Q9NPG4 1184 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 SEPT11Q9NVA2 429 aaKnown RBP14.96□□□□□ -0.01
RPS28-201ENST00000417088 UBA2Q9UBT2 640 aaPredicted RBP14.96□□□□□ -0.01
RPS28-201ENST00000417088 LIMA1Q9UHB6 759 aaKnown RBP14.96□□□□□ -0.01
RPS28-201ENST00000417088 KIF26BQ2KJY2 2108 aa14.96□□□□□ -0.01
RPS28-201ENST00000417088 ANKRD62A6NC57 917 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 TMEM110-MUSTN1A8MSY1 372 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 LGALS16A8MUM7 142 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 CDRT15L2A8MXV6 281 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 FGF10O15520 208 aaPredicted RBP14.95□□□□□ -0.02
RPS28-201ENST00000417088 BUB1BO60566 1050 aaPredicted RBP14.95□□□□□ -0.02
RPS28-201ENST00000417088 C6P13671 934 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 BLKP51451 505 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 AIF1P55008 147 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 RHDQ02161 417 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 OGDHQ02218 1023 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 CFHR1Q03591 330 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 UGP2Q16851 508 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 ALG11Q2TAA5 492 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 TAF1BQ53T94 588 aaPredicted RBP14.95□□□□□ -0.02
RPS28-201ENST00000417088 NYAP1Q6ZVC0 841 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 DNAAF5Q86Y56 855 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 HID1Q8IV36 788 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 FSTL5Q8N475 847 aaPredicted RBP14.95□□□□□ -0.02
RPS28-201ENST00000417088 WBP1Q96G27 269 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 APOOQ9BUR5 198 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 EDEM3Q9BZQ6 932 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 SUV39H2Q9H5I1 410 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 LRRC19Q9H756 370 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 LMBRD1Q9NUN5 540 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 GULP1Q9UBP9 304 aa14.95□□□□□ -0.02
RPS28-201ENST00000417088 J3KR12 359 aa14.94□□□□□ -0.02
RPS28-201ENST00000417088 NTN3O00634 580 aaPredicted RBP14.94□□□□□ -0.02
RPS28-201ENST00000417088 PRAMEF11O60813 436 aa14.94□□□□□ -0.02
RPS28-201ENST00000417088 RASGRP1O95267 797 aa14.94□□□□□ -0.02
RPS28-201ENST00000417088 PLA2G2AP14555 144 aa14.94□□□□□ -0.02
RPS28-201ENST00000417088 VAC14Q08AM6 782 aa14.94□□□□□ -0.02
RPS28-201ENST00000417088 SPIDRQ14159 915 aa14.94□□□□□ -0.02
RPS28-201ENST00000417088 INPP5AQ14642 412 aa14.94□□□□□ -0.02
RPS28-201ENST00000417088 GRM3Q14832 879 aa14.94□□□□□ -0.02
RPS28-201ENST00000417088 NFATC4Q14934 902 aa14.94□□□□□ -0.02
RPS28-201ENST00000417088 AGERQ15109 404 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms