RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 UTS2BQ765I0 119 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CHST3Q7LGC8 479 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 PTF1AQ7RTS3 328 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 DSG4Q86SJ6 1040 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 RHOT2Q8IXI1 618 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 ADGRG2Q8IZP9 1017 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 MIER2Q8N344 545 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 RASGEF1CQ8N431 466 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 ICA1LQ8NDH6 482 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 TRPV3Q8NET8 790 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 SPATA4Q8NEY3 305 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 NUP43Q8NFH3 380 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 FANK1Q8TC84 345 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 METTL6Q8TCB7 284 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 MAGEC3Q8TD91 643 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 PAQR8Q8TEZ7 354 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CCDC12Q8WUD4 166 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 LMBR1Q8WVP7 490 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 KLHL6Q8WZ60 621 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 GFM2Q969S9 779 aaKnown RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 AZIN2Q96A70 460 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CIDECQ96AQ7 238 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 FAM122AQ96E09 287 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 SIPA1Q96FS4 1042 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 APIPQ96GX9 242 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 ERO1AQ96HE7 468 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 REXO5Q96IC2 774 aaKnown RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 MAGED4Q96JG8 741 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CCDC42Q96M95 316 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 NSMCE2Q96MF7 247 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 PWWP2AQ96N64 755 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 OPALINQ96PE5 141 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 OR1F2PQ96R84 312 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 PANX2Q96RD6 677 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 MMS19Q96T76 1030 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 RIT2Q99578 217 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 SLC29A1Q99808 456 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 MRIQ9BWK5 157 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 C1QTNF3Q9BXJ4 246 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 TEX12Q9BXU0 123 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 GPR63Q9BZJ6 419 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 KLHL4Q9C0H6 718 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 POLR1EQ9GZS1 481 aaKnown RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 KLHL25Q9H0H3 589 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 GBA3Q9H227 469 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 TPK1Q9H3S4 243 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 RNPEPQ9H4A4 650 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 SH2D4AQ9H788 454 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 EXO5Q9H790 373 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 TDRD3Q9H7E2 651 aaKnown RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 ATP13A3Q9H7F0 1226 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 COQ10BQ9H8M1 238 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 C14orf93Q9H972 538 aaKnown RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CABP5Q9NP86 173 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 MRPL40Q9NQ50 206 aaKnown RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CENPMQ9NSP4 180 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CCM2LQ9NUG4 571 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 GALNT8Q9NY28 637 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 TAB2Q9NYJ8 693 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CYP39A1Q9NYL5 469 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 NDUFA13Q9P0J0 144 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 THEGQ9P2T0 379 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 FBLN5Q9UBX5 448 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 TRIM10Q9UDY6 481 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 SUSD2Q9UGT4 822 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 NDOR1Q9UHB4 597 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 ATP6V1HQ9UI12 483 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 LCMT1Q9UIC8 334 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CORO1CQ9ULV4 474 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-203ENST00000414174 TBX20Q9UMR3 447 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 SRPK3Q9UPE1 567 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 ERVK-11Q9UQG0 969 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 CHKBQ9Y259 395 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 DTX4Q9Y2E6 619 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 STXBP5LQ9Y2K9 1186 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 HCFC2Q9Y5Z7 792 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 FHOD1Q9Y613 1164 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 SLC12A7Q9Y666 1083 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 POMT1Q9Y6A1 747 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 TAF6LQ9Y6J9 622 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 PPIP5K1Q6PFW1 1433 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 PHLPP2Q6ZVD8 1323 aa3.69□□□□□ -1.82
SF3B1-203ENST00000414174 ABCC11Q96J66 1382 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 MAP3K5Q99683 1374 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 TRAV34A0A0B4J273 112 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 A0A1B0GTQ1 180 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 A0A1W2PN81 502 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 A0A1W2PPC4 97 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 A0A1W2PQ45 241 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-203ENST00000414174 A0A1W2PQY0 241 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 TCRBV16S1A1N1A0A5B0 115 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 TMEM120BA0PK00 339 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 WTIPA6NIX2 430 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF716A6NP11 495 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 GOLGA8KD6RF30 607 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 PTGES3LE9PB15 166 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 H3BNC9 293 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 HIP1O00291 1037 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 ARHGAP6O43182 974 aa3.68□□□□□ -1.82
SF3B1-203ENST00000414174 NDUFA2O43678 99 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms