RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 POP1Q99575 1024 aaKnown RBP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 FANCEQ9HB96 536 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 THG1LQ9NWX6 298 aaKnown RBP9.51□□□□□ -0.89
SNHG3-201ENST00000413987 WBP1LQ9NX94 342 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 GCNT4Q9P109 453 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 IL19Q9UHD0 177 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 AURKCQ9UQB9 309 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 UMODL1Q5DID0 1318 aa9.51□□□□□ -0.89
SNHG3-201ENST00000413987 CDH23Q9H251 3354 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 HAS3O00219 553 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 GSC2O15499 205 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 TMCC1O94876 653 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 CBX6O95503 412 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 TROVE2P10155 538 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNHG3-201ENST00000413987 ACADMP11310 421 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 SERPINF1P36955 418 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 RTP1P59025 263 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 C19orf57Q0VDD7 668 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 CHAF1BQ13112 559 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 HSP90AA5PQ58FG0 334 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 TOR1AIP1Q5JTV8 583 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 TCTE1Q5JU00 501 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 STXBP5Q5T5C0 1151 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 MTFR2Q6P444 385 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 CLEC2AQ6UVW9 174 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 NLRP9Q7RTR0 991 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 TMEM40Q8WWA1 233 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 NRG4Q8WWG1 115 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 POMGNT1Q8WZA1 660 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 NCLNQ969V3 563 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 MCUR1Q96AQ8 359 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 CPB2Q96IY4 423 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 OSMRQ99650 979 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 BCL7BQ9BQE9 202 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 FAM213AQ9BRX8 229 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 CADM1Q9BY67 442 aaKnown RBP9.5□□□□□ -0.89
SNHG3-201ENST00000413987 ST6GALNAC4Q9H4F1 302 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 TASP1Q9H6P5 420 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 C17orf75Q9HAS0 396 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 SERINC1Q9NRX5 453 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 TMEM160Q9NX00 188 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 DNAJB9Q9UBS3 223 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 DNAJB4Q9UDY4 337 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 SPO11Q9Y5K1 396 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 UBE4BO95155 1302 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 SMIM31A0A1B0GVY4 71 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 F8W8V4 182 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 GYG2O15488 501 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 MSCO60682 206 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 ABHD2P08910 425 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 CYP2C9P11712 490 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 RAG1P15918 1043 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 KCNA5P22460 613 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 LIG4P49917 911 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 WDR4P57081 412 aaKnown RBP9.5□□□□□ -0.89
SNHG3-201ENST00000413987 OSTNP61366 133 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 YWHAHQ04917 246 aaPredicted RBP9.5□□□□□ -0.89
SNHG3-201ENST00000413987 MBTD1Q05BQ5 628 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 DNAJC3Q13217 504 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 POLD3Q15054 466 aaPredicted RBP9.5□□□□□ -0.89
SNHG3-201ENST00000413987 KCTD19Q17RG1 926 aaPredicted RBP9.5□□□□□ -0.89
SNHG3-201ENST00000413987 SCARA3Q6AZY7 606 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 GDF6Q6KF10 455 aaPredicted RBP9.5□□□□□ -0.89
SNHG3-201ENST00000413987 CDH26Q8IXH8 852 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 AUTS2Q8WXX7 1259 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 CDKL2Q92772 493 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 CCDC127Q96BQ5 260 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 NSL1Q96IY1 281 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 SYT11Q9BT88 431 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 BTBD1Q9H0C5 482 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 TMEM206Q9H813 350 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 DMAC2Q9NW81 257 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 TOR4AQ9NXH8 423 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 COX16Q9P0S2 106 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 WDR37Q9Y2I8 494 aa9.5□□□□□ -0.89
SNHG3-201ENST00000413987 NRCAMQ92823 1304 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 GTPBP1O00178 669 aaKnown RBP9.49□□□□□ -0.89
SNHG3-201ENST00000413987 KRT36O76013 467 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 GAS8O95995 478 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 PRKCBP05771 671 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 PABPC4LP0CB38 370 aaKnown RBP9.49□□□□□ -0.89
SNHG3-201ENST00000413987 TNFSF9P41273 254 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 CCR5P51681 352 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 MRPS5P82675 430 aaKnown RBP9.49□□□□□ -0.89
SNHG3-201ENST00000413987 KRT17Q04695 432 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 DMPKQ09013 629 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 DPYSQ14117 519 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 HABP2Q14520 560 aaPredicted RBP9.49□□□□□ -0.89
SNHG3-201ENST00000413987 CBWD6Q4V339 395 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 ACSBG2Q5FVE4 666 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 CBWD3Q5JTY5 395 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 CBWD5Q5RIA9 395 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 C6orf163Q5TEZ5 329 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 EEF1DP3Q658K8 133 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 LHX8Q68G74 356 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 ISLR2Q6UXK2 745 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 MARK2Q7KZI7 788 aaKnown RBP9.49□□□□□ -0.89
SNHG3-201ENST00000413987 CLNKQ7Z7G1 428 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 PHLDB2Q86SQ0 1253 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 TMEM192Q8IY95 271 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms