RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 MMP12P39900 470 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 RGRP47804 291 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 AFF3P51826 1226 aaKnown RBP8.29□□□□□ -1.08
RPE-204ENST00000411934 METAP1P53582 386 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 TAS2R38P59533 333 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 DYNLT1P63172 113 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 AP1B1Q10567 949 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 TEAD4Q15561 434 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 UGP2Q16851 508 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 TMEM52BQ4KMG9 183 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 TMEM259Q4ZIN3 620 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 KAZNQ674X7 775 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 TBC1D3GQ6DHY5 549 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 TBC1D3CQ6IPX1 549 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 NAPEPLDQ6IQ20 393 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 LEKR1Q6ZMV7 388 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 PRR23CQ6ZRP0 262 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 FAM124AQ86V42 546 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 REXO1L1PQ8IX06 675 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 RGL4Q8IZJ4 473 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 TBC1D3Q8IZP1 549 aaPredicted RBP8.29□□□□□ -1.08
RPE-204ENST00000411934 PGBD5Q8N414 524 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 FRMD1Q8N878 549 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 OR6K2Q8NGY2 324 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 ACTL9Q8TC94 416 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 HTR3CQ8WXA8 447 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 EXOC2Q96KP1 924 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 TEKT5Q96M29 485 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 LENG8Q96PV6 779 aaPredicted RBP8.29□□□□□ -1.08
RPE-204ENST00000411934 LYSMD1Q96S90 227 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 SRPK1Q96SB4 655 aaKnown RBP8.29□□□□□ -1.08
RPE-204ENST00000411934 LGMNQ99538 433 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 C1QTNF7Q9BXJ2 289 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 TDRD1Q9BXT4 1180 aaKnown RBP8.29□□□□□ -1.08
RPE-204ENST00000411934 SLC25A51Q9H1U9 297 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 ARRDC1-AS1Q9H2J1 176 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 CAPN10Q9HC96 672 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 NT5MQ9NPB1 228 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 RBM22Q9NW64 420 aaKnown RBP eCLIP8.29□□□□□ -1.088e-8■■■■■ 33.3
RPE-204ENST00000411934 TRHDEQ9UKU6 1024 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 PHTF1Q9UMS5 762 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 SLC6A14Q9UN76 642 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 INVSQ9Y283 1065 aa8.29□□□□□ -1.08
RPE-204ENST00000411934 PCDH15Q96QU1 1955 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 GVINP1Q7Z2Y8 2422 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 PRAMEF26H0Y7S4 382 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 KCNK1O00180 336 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 RIOK3O14730 519 aaKnown RBP8.28□□□□□ -1.08
RPE-204ENST00000411934 YKT6O15498 198 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 KIF5CO60282 957 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 FZD6O60353 706 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 DFNA5O60443 496 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 FSBPO95073 299 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 PGLSO95336 258 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 MAP3K6O95382 1288 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 CPP00450 1065 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 ZNF883P0CG24 379 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 RBP3P10745 1247 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 CYP2A6P11509 494 aaPredicted RBP8.28□□□□□ -1.08
RPE-204ENST00000411934 ZNF30P17039 623 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 HNRNPA2B1P22626 353 aaKnown RBP8.28□□□□□ -1.08
RPE-204ENST00000411934 ITPKAP23677 461 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 PTPN3P26045 913 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 AKT2P31751 481 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 ABL2P42684 1182 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 OTUD4Q01804 1114 aaKnown RBP8.28□□□□□ -1.08
RPE-204ENST00000411934 ADCY2Q08462 1091 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 ZBTB17Q13105 803 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 NUMA1Q14980 2115 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 LPAL2Q16609 132 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 TRIM61Q5EBN2 209 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 ARMC12Q5T9G4 340 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 ITPRIPL1Q6GPH6 555 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 DRICH1Q6PGQ1 229 aaPredicted RBP8.28□□□□□ -1.08
RPE-204ENST00000411934 NPNTQ6UXI9 565 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 USP45Q70EL2 814 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 DPPA4Q7L190 304 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 TTC7BQ86TV6 843 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 DCP2Q8IU60 420 aaKnown RBP8.28□□□□□ -1.08
RPE-204ENST00000411934 OXR1Q8N573 874 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 C12orf50Q8NA57 414 aaPredicted RBP8.28□□□□□ -1.08
RPE-204ENST00000411934 TMEM145Q8NBT3 493 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 ARRDC2Q8TBH0 407 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 NETO1Q8TDF5 533 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 CXorf40AQ8TE69 158 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 PIGKQ92643 395 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 TADA1Q96BN2 335 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 RTP4Q96DX8 246 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 ERLEC1Q96DZ1 483 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 IMP4Q96G21 291 aaKnown RBP8.28□□□□□ -1.08
RPE-204ENST00000411934 MCCC1Q96RQ3 725 aaPredicted RBP8.28□□□□□ -1.08
RPE-204ENST00000411934 NAP1L3Q99457 506 aaPredicted RBP8.28□□□□□ -1.08
RPE-204ENST00000411934 SEMA3CQ99985 751 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 ORAI3Q9BRQ5 295 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 C1QTNF2Q9BXJ5 285 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 TLR10Q9BXR5 811 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 NOD2Q9HC29 1040 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 HOMER3Q9NSC5 361 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 EIF2B4Q9UI10 523 aaKnown RBP8.28□□□□□ -1.08
RPE-204ENST00000411934 TTC7AQ9ULT0 858 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms