RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 CHSY3Q70JA7 882 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 MPP4Q96JB8 637 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 PRPF18Q99633 342 aaKnown RBP15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 NDFIP2Q9NV92 336 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 RHBDL2Q9NX52 303 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 UTP6Q9NYH9 597 aaKnown RBP15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 RNF181Q9P0P0 153 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 TLL2Q9Y6L7 1015 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 MIA3Q5JRA6 1907 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 CPB1P15086 417 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 BDNFP23560 247 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 TECRLQ5HYJ1 363 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 NOMO2Q5JPE7 1267 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 BTBD8Q5XKL5 378 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 PTAR1Q7Z6K3 402 aaPredicted RBP15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 TLK2Q86UE8 772 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 ASB9Q96DX5 294 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 OLFM1Q99784 485 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 MRM3Q9HC36 420 aaKnown RBP15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 CSNK1G1Q9HCP0 422 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 TRPC7Q9HCX4 862 aa15.29■□□□□ 0.04
LYSMD4-204ENST00000409796 DOCK3Q8IZD9 2030 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 COL4A4P53420 1690 aaPredicted RBP15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 FBP2O00757 339 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 MATN3O15232 486 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 ATP6V1G1O75348 118 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 FAM58BPP0C7Q3 252 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 RGS2P41220 211 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 POU4F1Q01851 419 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 PPP1R3AQ16821 1122 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 MGAT5BQ3V5L5 792 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 KIAA0930Q6ICG6 404 aaPredicted RBP15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 CCDC117Q8IWD4 279 aaPredicted RBP15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 PNPLA1Q8N8W4 532 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 SNX31Q8N9S9 440 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 IRGQQ8WZA9 623 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 LPPQ93052 612 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 MRGPRX2Q96LB1 330 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 RTP3Q9BQQ7 232 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 PAAF1Q9BRP4 392 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 ENTPD7Q9NQZ7 604 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 RBM22Q9NW64 420 aaKnown RBP eCLIP15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 ARHGEF38Q9NXL2 777 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 PLK2Q9NYY3 685 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 GMEB1Q9Y692 573 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 hCG_2014768A0A024R1R8 64 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 A8MT66 165 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 HAS3O00219 553 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 MYL3P08590 195 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 HSPA13P48723 471 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 KPNA2P52292 529 aaKnown RBP15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 PLK1P53350 603 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 PFKPQ01813 784 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 LRP8Q14114 963 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 TRIM25Q14258 630 aaKnown RBP15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 MYLK3Q32MK0 819 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 AGKQ53H12 422 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 C1QTNF12Q5T7M4 302 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 OLFML2BQ68BL8 750 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 REP15Q6BDI9 236 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 NEPROQ6NW34 567 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 PAOXQ6QHF9 649 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 PLEKHH3Q7Z736 793 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 ZNF513Q8N8E2 541 aaPredicted RBP15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 PTCD2Q8WV60 388 aaKnown RBP15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 MS4A4AQ96JQ5 239 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 ZFRQ96KR1 1074 aaKnown RBP15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 FSD1LQ9BXM9 530 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 SLC2A11Q9BYW1 496 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 SEMA6AQ9H2E6 1030 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 SLC38A7Q9NVC3 462 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 CACNA2D2Q9NY47 1150 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 EPS15L1Q9UBC2 864 aa15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 SUCOQ9UBS9 1254 aaKnown RBP15.28■□□□□ 0.04
LYSMD4-204ENST00000409796 CCL15-CCL14A0A0B4J2E2 113 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 CASTOR2A6NHX0 329 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 THP07101 528 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 ZNF26P17031 533 aaPredicted RBP15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 PAMP19021 973 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 BEX3Q00994 111 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 RALGDSQ12967 914 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 FASTKQ14296 549 aaKnown RBP15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 SQLEQ14534 574 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 CCL15Q16663 113 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 KLHDC10Q6PID8 442 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 RANBP10Q6VN20 620 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 CUZD1Q86UP6 607 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 RBM38Q9H0Z9 239 aaKnown RBP15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 UNC93B1Q9H1C4 597 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 MEAF6Q9HAF1 191 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 PTTG2Q9NZH5 202 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 CCDC167Q9P0B6 97 aa15.27■□□□□ 0.04
LYSMD4-204ENST00000409796 CCDC160A6NGH7 325 aa15.27■□□□□ 0.03
LYSMD4-204ENST00000409796 UBDO15205 165 aa15.27■□□□□ 0.03
LYSMD4-204ENST00000409796 PAGE1O75459 146 aa15.27■□□□□ 0.03
LYSMD4-204ENST00000409796 IGLV3-25P01717 112 aa15.27■□□□□ 0.03
LYSMD4-204ENST00000409796 C8BP07358 591 aa15.27■□□□□ 0.03
LYSMD4-204ENST00000409796 PSMD8P48556 350 aa15.27■□□□□ 0.03
LYSMD4-204ENST00000409796 STX5Q13190 355 aa15.27■□□□□ 0.03
LYSMD4-204ENST00000409796 APOFQ13790 326 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms