RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 ARHGAP8P85298 464 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 ACVR1Q04771 509 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 USP4Q13107 963 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 UBAP2LQ14157 1087 aaKnown RBP20.26■□□□□ 0.83
USP39-204ENST00000409766 SPOUT1Q5T280 376 aaKnown RBP20.26■□□□□ 0.83
USP39-204ENST00000409766 ICE2Q659A1 982 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 PTAR1Q7Z6K3 402 aaPredicted RBP20.26■□□□□ 0.83
USP39-204ENST00000409766 SLC39A11Q8N1S5 342 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 DRC3Q9H069 523 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 CDH19Q9H159 772 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 XPR1Q9UBH6 696 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 TAGLN3Q9UI15 199 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 KCTD3Q9Y597 815 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 C2orf78A6NCI8 922 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 KDELR3O43731 214 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 SERPINF2P08697 491 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 AOC1P19801 751 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 GRIA4P48058 902 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 CLCN5P51795 746 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 SLC12A2P55011 1212 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 TSNAXIP1Q2TAA8 658 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 VWA5B1Q5TIE3 1220 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 C1orf53Q5VUE5 145 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 SPATA6LQ8N4H0 392 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 TEX9Q8N6V9 391 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 TMEM169Q96HH4 297 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 ZNF558Q96NG5 402 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 PSKH2Q96QS6 385 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 NDNQ99608 321 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 KLF16Q9BXK1 252 aaPredicted RBP20.26■□□□□ 0.83
USP39-204ENST00000409766 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.26■□□□□ 0.83
USP39-204ENST00000409766 SEPT3Q9UH03 358 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 AGO1Q9UL18 857 aaKnown RBP20.26■□□□□ 0.83
USP39-204ENST00000409766 L3MBTL1Q9Y468 752 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 LTBP2Q14767 1821 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 ILVBLA1L0T0 632 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 CCL22O00626 93 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 MYL4P12829 197 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 GM2AP17900 193 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 PLD1Q13393 1074 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 WASHC2DQ5SRD0 308 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 ADGRF1Q5T601 910 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 TMCO2Q7Z6W1 182 aaPredicted RBP20.25■□□□□ 0.83
USP39-204ENST00000409766 LMNTD2Q8IXW0 634 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 BBS5Q8N3I7 341 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 OR6P1Q8NGX9 317 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 PEX13Q92968 403 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 MOCOSQ96EN8 888 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 TRIB3Q96RU7 358 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 OLFM1Q99784 485 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 SPON2Q9BUD6 331 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 DENND2DQ9H6A0 471 aaPredicted RBP20.25■□□□□ 0.83
USP39-204ENST00000409766 COG4Q9H9E3 785 aa20.25■□□□□ 0.83
USP39-204ENST00000409766 UBA2Q9UBT2 640 aaPredicted RBP20.25■□□□□ 0.83
USP39-204ENST00000409766 B2RBV5 119 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 DLX3O60479 287 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 GLDCP23378 1020 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 CPA2P48052 419 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 OXCT1P55809 520 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 PRAMEP78395 509 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 RCN2Q14257 317 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 GALNT3Q14435 633 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 SLC14A2Q15849 920 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 TAF12Q16514 161 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 EPGNQ6UW88 154 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 CHST9Q7L1S5 443 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 PNPLA1Q8N8W4 532 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 HEXDCQ8WVB3 486 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 WBP2Q969T9 261 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 HERC2P3Q9BVR0 1158 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 CRISPLD2Q9H0B8 497 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 ILKAPQ9H0C8 392 aaPredicted RBP20.24■□□□□ 0.83
USP39-204ENST00000409766 MRPL46Q9H2W6 279 aaKnown RBP20.24■□□□□ 0.83
USP39-204ENST00000409766 RC3H2Q9HBD1 1191 aaKnown RBP20.24■□□□□ 0.83
USP39-204ENST00000409766 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.24■□□□□ 0.834e-10■■■□□ 17.5
USP39-204ENST00000409766 MARCH4Q9P2E8 410 aaPredicted RBP20.24■□□□□ 0.83
USP39-204ENST00000409766 MKI67P46013 3256 aaKnown RBP20.24■□□□□ 0.83
USP39-204ENST00000409766 A0A1B0GVM2 712 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 TCAF2A6NFQ2 919 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 S1PR4O95977 384 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 CHRNGP07510 517 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 NAGLUP54802 743 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 LAMB3Q13751 1172 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 RAB33AQ14088 237 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 E2F5Q15329 346 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 SWT1Q5T5J6 900 aaKnown RBP20.24■□□□□ 0.83
USP39-204ENST00000409766 SETD3Q86TU7 594 aaPredicted RBP20.24■□□□□ 0.83
USP39-204ENST00000409766 TMPRSS6Q8IU80 811 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 TDRD5Q8NAT2 981 aaKnown RBP20.24■□□□□ 0.83
USP39-204ENST00000409766 BRSK1Q8TDC3 778 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 BLOC1S5Q8TDH9 187 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 NSMCE3Q96MG7 304 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 MRPL57Q9BQC6 102 aaKnown RBP20.24■□□□□ 0.83
USP39-204ENST00000409766 MMADHCQ9H3L0 296 aaPredicted RBP20.24■□□□□ 0.83
USP39-204ENST00000409766 IGSF5Q9NSI5 407 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 TBC1D30Q9Y2I9 924 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 RAP2CQ9Y3L5 183 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 ARL5AQ9Y689 179 aa20.24■□□□□ 0.83
USP39-204ENST00000409766 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.23■□□□□ 0.83
USP39-204ENST00000409766 DIAPH2O60879 1101 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms