RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 KIAA0907Q7Z7F0 614 aaPredicted RBP14.17□□□□□ -0.14
GPNMB-203ENST00000409458 ADIPOR2Q86V24 386 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 C12orf40Q86WS4 652 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.17□□□□□ -0.14
GPNMB-203ENST00000409458 ZNF557Q8N988 423 aaPredicted RBP14.17□□□□□ -0.14
GPNMB-203ENST00000409458 OR13J1Q8NGT2 312 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 SMIM14Q96QK8 99 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 CPNE1Q99829 537 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 TRPV4Q9HBA0 871 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 GGT7Q9UJ14 662 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 SLC25A13Q9UJS0 675 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 HS3ST2Q9Y278 367 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 ARIH1Q9Y4X5 557 aaPredicted RBP14.17□□□□□ -0.14
GPNMB-203ENST00000409458 KCTD3Q9Y597 815 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 SPO11Q9Y5K1 396 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 SZT2Q5T011 3432 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 DOCK8Q8NF50 2099 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 C5orf42Q9H799 3197 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 CXorf51AA0A1B0GTR3 108 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 HOXC11O43248 304 aaPredicted RBP14.16□□□□□ -0.14
GPNMB-203ENST00000409458 LDB2O43679 373 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 TYROBPO43914 113 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 KRT38O76015 456 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 VAPBO95292 243 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 PAPSS2O95340 614 aaPredicted RBP14.16□□□□□ -0.14
GPNMB-203ENST00000409458 ADH1CP00326 375 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 BMP1P13497 986 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 ALADP13716 330 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 PAMP19021 973 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 CNTFP26441 200 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 LSP1P33241 339 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 AP1S1P61966 158 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 DLX2Q07687 328 aaPredicted RBP14.16□□□□□ -0.14
GPNMB-203ENST00000409458 SLC20A2Q08357 652 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 LRRC14Q15048 493 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 GEN1Q17RS7 908 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 DGKKQ5KSL6 1271 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 LGSNQ5TDP6 509 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 TMEM215Q68D42 235 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 C22orf39Q6P5X5 142 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 SH2D5Q6ZV89 423 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 STRA8Q7Z7C7 330 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 METTL3Q86U44 580 aaKnown RBP14.16□□□□□ -0.14
GPNMB-203ENST00000409458 AHI1Q8N157 1196 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 PDCD6IPQ8WUM4 868 aaKnown RBP14.16□□□□□ -0.14
GPNMB-203ENST00000409458 MYLIPQ8WY64 445 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 MTBPQ96DY7 904 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 S1PR5Q9H228 398 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 EBF3Q9H4W6 596 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 MLXIPLQ9NP71 852 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 SSU72Q9NP77 194 aaKnown RBP14.16□□□□□ -0.14
GPNMB-203ENST00000409458 OBP2AQ9NY56 170 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.16□□□□□ -0.14
GPNMB-203ENST00000409458 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.16□□□□□ -0.14
GPNMB-203ENST00000409458 EVLQ9UI08 416 aaPredicted RBP14.16□□□□□ -0.14
GPNMB-203ENST00000409458 CDH7Q9ULB5 785 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 SMG5Q9UPR3 1016 aaKnown RBP14.16□□□□□ -0.14
GPNMB-203ENST00000409458 ARL5AQ9Y689 179 aa14.16□□□□□ -0.14
GPNMB-203ENST00000409458 FAM47DPA6NHR8 397 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 FZD6O60353 706 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 RFPL1O75677 317 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 PIGNO95427 931 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 IGSF6O95976 241 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 HOXB8P17481 243 aaPredicted RBP14.15□□□□□ -0.14
GPNMB-203ENST00000409458 GKP32189 559 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 GBP2P32456 591 aaPredicted RBP14.15□□□□□ -0.14
GPNMB-203ENST00000409458 ECT2LQ008S8 904 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 DMC1Q14565 340 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 GRTP1Q5TC63 336 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 MBLAC2Q68D91 279 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 TANGO2Q6ICL3 276 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 CNTN4Q8IWV2 1026 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 BANPQ8N9N5 519 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 RMDN1Q96DB5 314 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 MYO19Q96H55 970 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 MYADMQ96S97 322 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 RBBP8Q99708 897 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 MCMBPQ9BTE3 642 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 SLC2A11Q9BYW1 496 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 INTS9Q9NV88 658 aaKnown RBP14.15□□□□□ -0.14
GPNMB-203ENST00000409458 TXNDC16Q9P2K2 825 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 FBXO10Q9UK96 956 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 KIAA1549LQ6ZVL6 1849 aa14.15□□□□□ -0.14
GPNMB-203ENST00000409458 OTOL1A6NHN0 477 aaPredicted RBP14.14□□□□□ -0.15
GPNMB-203ENST00000409458 CCL22O00626 93 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 BUD23O43709 281 aaKnown RBP14.14□□□□□ -0.15
GPNMB-203ENST00000409458 NFATC1O95644 943 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 ITGA2BP08514 1039 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 CISD3P0C7P0 127 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 PYGBP11216 843 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 CA4P22748 312 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 RPA3P35244 121 aaPredicted RBP14.14□□□□□ -0.15
GPNMB-203ENST00000409458 CCNFP41002 786 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 ABCG1P45844 678 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 CSNK1DP48730 415 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 ARSDP51689 593 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 MPP1Q00013 466 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 SLC18A2Q05940 514 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 SULT2A1Q06520 285 aa14.14□□□□□ -0.15
GPNMB-203ENST00000409458 PTPRCAPQ14761 206 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms