RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 WDR41Q9HAD4 459 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 VTI1BQ9UEU0 232 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 NUDT5Q9UKK9 219 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 ACOT9Q9Y305 439 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 WASH4PA8MWX3 477 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 E9PAM4 449 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 HAPLN1P10915 354 aaPredicted RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 ETS2P15036 469 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 ADSLP30566 484 aaPredicted RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 GSTT1P30711 240 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 LEPRP48357 1165 aaKnown RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 POLD2P49005 469 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 NRG1Q02297 640 aaPredicted RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 TNK2Q07912 1038 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 APOFQ13790 326 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 FSCN1Q16658 493 aaKnown RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 HMBOX1Q6NT76 420 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 MFN1Q8IWA4 741 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 SLC39A13Q96H72 371 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 C3orf30Q96M34 536 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 PARK7Q99497 189 aaKnown RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 MRPL46Q9H2W6 279 aaKnown RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 SLC38A7Q9NVC3 462 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 NSMCE4AQ9NXX6 385 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 MARCH4Q9P2E8 410 aaPredicted RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 CDYLQ9Y232 598 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 AAR2Q9Y312 384 aaKnown RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 Q9Y3F1 56 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 C7orf72A4D263 438 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 J3KR12 359 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 C8BP07358 591 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 ALDOCP09972 364 aaKnown RBP9.92□□□□□ -0.82
MSH2-202ENST00000406134 ATXN1LP0C7T5 689 aaKnown RBP9.92□□□□□ -0.82
MSH2-202ENST00000406134 DNAJB2P25686 324 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 INHBCP55103 352 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 PPP2R5DQ14738 602 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 RWDD4Q6NW29 188 aaKnown RBP9.92□□□□□ -0.82
MSH2-202ENST00000406134 POTEHQ6S545 545 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 TMEM126BQ8IUX1 230 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 FUNDC1Q8IVP5 155 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 ATPAF2Q8N5M1 289 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 PTCD2Q8WV60 388 aaKnown RBP9.92□□□□□ -0.82
MSH2-202ENST00000406134 SGF29Q96ES7 293 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 IMP4Q96G21 291 aaKnown RBP9.92□□□□□ -0.82
MSH2-202ENST00000406134 SIK2Q9H0K1 926 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 EPB41L1Q9H4G0 881 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 DMAP1Q9NPF5 467 aaPredicted RBP9.92□□□□□ -0.82
MSH2-202ENST00000406134 VPS45Q9NRW7 570 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 TRPV2Q9Y5S1 764 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 E7ENX8 843 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 CCL22O00626 93 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 KIF3CO14782 793 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 CPB1P15086 417 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 STMN1P16949 149 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 CHN2P52757 468 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 SEMA3AQ14563 771 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 CFAP157Q5JU67 520 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 ZNF549Q6P9A3 640 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 C16orf89Q6UX73 402 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 KDELC2Q7Z4H8 507 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 PHYKPLQ8IUZ5 450 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 RTL3Q8N8U3 475 aaKnown RBP9.92□□□□□ -0.82
MSH2-202ENST00000406134 PTERQ96BW5 349 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 LRCH3Q96II8 777 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 MRPL57Q9BQC6 102 aaKnown RBP9.92□□□□□ -0.82
MSH2-202ENST00000406134 COPS7BQ9H9Q2 264 aaPredicted RBP9.92□□□□□ -0.82
MSH2-202ENST00000406134 SLC52A3Q9NQ40 469 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 CACNA2D2Q9NY47 1150 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 FBXO5Q9UKT4 447 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 GIT1Q9Y2X7 761 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 AK5Q9Y6K8 562 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 A0A1B0GTL3 188 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 PRORSD1PA6NEY8 169 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 GLTPD2A6NH11 291 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 POMCP01189 267 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 RPL9P32969 192 aaKnown RBP9.92□□□□□ -0.82
MSH2-202ENST00000406134 GPR15P49685 360 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 ATXN3P54252 364 aaPredicted RBP9.92□□□□□ -0.82
MSH2-202ENST00000406134 SETMARQ53H47 684 aaPredicted RBP9.92□□□□□ -0.82
MSH2-202ENST00000406134 IL23RQ5VWK5 629 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 AP1ARQ63HQ0 302 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 PIM3Q86V86 326 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 SERINC5Q86VE9 423 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 RSPH1Q8WYR4 309 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 ELMO2Q96JJ3 720 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 RANBP9Q96S59 729 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 PCDHAC1Q9H158 963 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 DTNAQ9Y4J8 743 aa9.92□□□□□ -0.82
MSH2-202ENST00000406134 KIAA1671Q9BY89 1806 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 ANAPC1Q9H1A4 1944 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 A0A087X1B8 175 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 PPP6CO00743 305 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 PMPCBO75439 489 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 CTSHP09668 335 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 MED21Q13503 144 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 ALFQ53S48 1182 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 BRMS1LQ5PSV4 323 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 LARP4Q71RC2 724 aaKnown RBP eCLIP9.91□□□□□ -0.82
MSH2-202ENST00000406134 GALNT7Q86SF2 657 aa9.91□□□□□ -0.82
MSH2-202ENST00000406134 LDB1Q86U70 411 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms