RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CNDP2Q96KP4 475 aaKnown RBP5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 C1orf74Q96LT6 269 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 TEFMQ96QE5 360 aaKnown RBP5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 SIGLEC11Q96RL6 698 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 TMEM79Q9BSE2 394 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 H2AFJQ9BTM1 129 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 TEX12Q9BXU0 123 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 NUAK2Q9H093 628 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 PLEKHA4Q9H4M7 779 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 CXorf56Q9H5V9 222 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 TUBA8Q9NY65 449 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 HAO1Q9UJM8 370 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 FBXO4Q9UKT5 387 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 ZHX1Q9UKY1 873 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 DHDHQ9UQ10 334 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 FAM169AQ9Y6X4 670 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 EMSYQ7Z589 1322 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 ADGRF5Q8IZF2 1346 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 LY6G6EA0A0G2JKS1 128 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 FAM170AA1A519 330 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 TARSL2A2RTX5 802 aaKnown RBP5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 TSPY2A6NKD2 308 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 TTC36A6NLP5 189 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 EIF3CLB5ME19 914 aaKnown RBP5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 PPEF2O14830 753 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 SCAMP1O15126 338 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 CBX6O95503 412 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 TSPY3P0CV98 308 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 TSPY8P0CW00 308 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 AKR1A1P14550 325 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 POU1F1P28069 291 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 SKIV2L2P42285 1042 aaKnown RBP5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 PIP4K2AP48426 406 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 TSPY1Q01534 308 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 FRG1Q14331 258 aaKnown RBP5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 KPNB1Q14974 876 aaKnown RBP5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 TRIP6Q15654 476 aaKnown RBP5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 KYNUQ16719 465 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 TMEM266Q2M3C6 531 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 ALG11Q2TAA5 492 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 EDRF1Q3B7T1 1238 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 C5orf22Q49AR2 442 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 BMP2KLQ5H9B9 411 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 C10orf76Q5T2E6 689 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 HECTD3Q5T447 861 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 C10orf25Q5T742 122 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 DHRS13Q6UX07 377 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 DENND5BQ6ZUT9 1274 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 VSIG1Q86XK7 387 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 TICAM1Q8IUC6 712 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 CNGA4Q8IV77 575 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 CNPY4Q8N129 248 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 TMEM217Q8N7C4 229 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 POC5Q8NA72 575 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 C16orf52Q8NHV5 167 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 DENND1AQ8TEH3 1009 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 HDAC7Q8WUI4 952 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 GTF3C6Q969F1 213 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 CCDC177Q9NQR7 707 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 ASAH2Q9NR71 780 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 MRPL15Q9P015 296 aaKnown RBP5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 MARCH4Q9P2E8 410 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 PCDHGB5Q9Y5G0 923 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 SESN1Q9Y6P5 492 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 MST1RQ04912 1400 aa5.14□□□□□ -1.59
HMGB1P13-201ENST00000406019 GLOD5A6NK44 160 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 USP17L23D6RBM5 183 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 IPO7O95373 1038 aaKnown RBP5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 RB1P06400 928 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 TUBBP07437 444 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 HOXB5P09067 269 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 IRF1P10914 325 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 CDAP32320 146 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 GNAQP50148 359 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 PPP5CP53041 499 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 ARSFP54793 590 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 YWHAZP63104 245 aaKnown RBP5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 AIMP1Q12904 312 aaKnown RBP5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 OLIG2Q13516 323 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 FGFBP1Q14512 234 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 PLCB4Q15147 1175 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 NTRK2Q16620 822 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 ME3Q16798 604 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 ASTE1Q2TB18 679 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 FAM171A1Q5VUB5 890 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 GPAT4Q86UL3 456 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 LINC00346Q8IVM7 164 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 CCDC34Q96HJ3 373 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 FIZ1Q96SL8 496 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 NDST4Q9H3R1 872 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 PDZD7Q9H5P4 517 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 GIMAP4Q9NUV9 329 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 DLGAP2Q9P1A6 1054 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 MTMR6Q9Y217 621 aa5.13□□□□□ -1.59
HMGB1P13-201ENST00000406019 A0A0A0MQY5 61 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 C2CD4BA6NLJ0 364 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 NPIPB11E5RHQ5 1161 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 SNAP23O00161 211 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 TLR2O60603 784 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 TBX10O75333 385 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms