RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 LAYNQ6UX15 382 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 PRPF39Q86UA1 669 aaKnown RBP15.91■□□□□ 0.14
MBD1-207ENST00000398488 SLC13A5Q86YT5 568 aaPredicted RBP15.91■□□□□ 0.14
MBD1-207ENST00000398488 RGL4Q8IZJ4 473 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 ATG4AQ8WYN0 398 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 FOXJ1Q92949 421 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 POLR1EQ9GZS1 481 aaKnown RBP15.91■□□□□ 0.14
MBD1-207ENST00000398488 BRD8Q9H0E9 1235 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 MIR1-1HGQ9H1L0 117 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 PCDH12Q9NPG4 1184 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 CA5BQ9Y2D0 317 aa15.91■□□□□ 0.14
MBD1-207ENST00000398488 A0A0U1RQS6 177 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 F5H423 210 aaPredicted RBP15.9■□□□□ 0.14
MBD1-207ENST00000398488 FANCGO15287 622 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 LATO43561 262 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 PRLP01236 227 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 RBP3P10745 1247 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 PRLRP16471 622 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 SERPINA4P29622 427 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 CCR5P51681 352 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 XRCC4Q13426 336 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 UGP2Q16851 508 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 KCTD19Q17RG1 926 aaPredicted RBP15.9■□□□□ 0.14
MBD1-207ENST00000398488 ZNF284Q2VY69 593 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 KDM7AQ6ZMT4 941 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 SYT12Q8IV01 421 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 ZNF567Q8N184 647 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 BBS5Q8N3I7 341 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 ZCCHC9Q8N567 271 aaKnown RBP15.9■□□□□ 0.14
MBD1-207ENST00000398488 SPATA22Q8NHS9 363 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 HTR3CQ8WXA8 447 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 TEKT5Q96M29 485 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 PCED1AQ9H1Q7 454 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 CARD9Q9H257 536 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 KDM4CQ9H3R0 1056 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 USP29Q9HBJ7 922 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 SEMA4GQ9NTN9 838 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 PCDHGA5Q9Y5G8 931 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 RAI2Q9Y5P3 530 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 GVINP1Q7Z2Y8 2422 aa15.9■□□□□ 0.14
MBD1-207ENST00000398488 UPK3BL1B0FP48 263 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 HACD1B0YJ81 288 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 UPK3BL2E5RIL1 263 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 AP1G1O43747 822 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 FZD6O60353 706 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 PCDH8O95206 1070 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 CETN2P41208 172 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 CD86P42081 329 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 BNC1Q01954 994 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 GRM3Q14832 879 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 TMEM259Q4ZIN3 620 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 BZW1Q7L1Q6 419 aaKnown RBP15.89■□□□□ 0.13
MBD1-207ENST00000398488 TRIM69Q86WT6 500 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 HORMAD1Q86X24 394 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 SLC35B2Q8TB61 432 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 HCAR2Q8TDS4 363 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 PDCD6IPQ8WUM4 868 aaKnown RBP15.89■□□□□ 0.13
MBD1-207ENST00000398488 PIH1D2Q8WWB5 315 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 TADA1Q96BN2 335 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 SLC6A18Q96N87 628 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 RBM15Q96T37 977 aaKnown RBP eCLIP15.89■□□□□ 0.13
MBD1-207ENST00000398488 HINFPQ9BQA5 517 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 GORASP1Q9BQQ3 440 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 GLOD4Q9HC38 313 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 PREBQ9HCU5 417 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 FZD3Q9NPG1 666 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 AMACRQ9UHK6 382 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 PCDHB9Q9Y5E1 797 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 FAM186AA6NE01 2351 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 RALGAPA1Q6GYQ0 2036 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.89■□□□□ 0.13
MBD1-207ENST00000398488 A0A1W2PPC4 97 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 IGLON5A6NGN9 336 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 A8MX80 341 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 RIOK3O14730 519 aaKnown RBP15.89■□□□□ 0.13
MBD1-207ENST00000398488 RAD51BO15315 384 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 MMP20O60882 483 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 PGLSO95336 258 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 MT-CYBP00156 380 aaPredicted RBP15.89■□□□□ 0.13
MBD1-207ENST00000398488 WNT1P04628 370 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 CD27P26842 260 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 MAPK8P45983 427 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 IRX4P78413 519 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 RALGDSQ12967 914 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 WDR45BQ5MNZ6 344 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 SEL1L2Q5TEA6 688 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 BRAT1Q6PJG6 821 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 C1orf54Q8WWF1 131 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 IMP4Q96G21 291 aaKnown RBP15.89■□□□□ 0.13
MBD1-207ENST00000398488 WDR24Q96S15 920 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 WRAP53Q9BUR4 548 aaKnown RBP15.89■□□□□ 0.13
MBD1-207ENST00000398488 TM9SF3Q9HD45 589 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 SMARCAL1Q9NZC9 954 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 UBP1Q9NZI7 540 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 DNPEPQ9ULA0 475 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 CHKBQ9Y259 395 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 JRKLQ9Y4A0 524 aa15.89■□□□□ 0.13
MBD1-207ENST00000398488 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.89■□□□□ 0.13
MBD1-207ENST00000398488 SLC31A1O15431 190 aa15.88■□□□□ 0.13
MBD1-207ENST00000398488 CEP104O60308 925 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms