RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 C9orf64Q5T6V5 341 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 BRAT1Q6PJG6 821 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 CAMK1DQ8IU85 385 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 PDCD6IPQ8WUM4 868 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 PTCD2Q8WV60 388 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 RMDN1Q96DB5 314 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 PPP1R16AQ96I34 528 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 TTC25Q96NG3 672 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 APOL2Q9BQE5 337 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 ARFGAP3Q9NP61 516 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 SAYSD1Q9NPB0 183 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 SAMD15Q9P1V8 674 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 HCN2Q9UL51 889 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 CHKBQ9Y259 395 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 WASF2Q9Y6W5 498 aa23.76■■□□□ 1.39
TSPAN4-202ENST00000397396 MAGEB16A2A368 324 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 C1QTNF3-AMACRE9PGA6 284 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 PIGNO95427 931 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 CPP00450 1065 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 ATXN1LP0C7T5 689 aaKnown RBP23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 H2AFXP16104 143 aaPredicted RBP23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 GRIA1P42261 906 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 SESN2P58004 480 aaPredicted RBP23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 CCDC38Q502W7 563 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 SPDYCQ5MJ68 293 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 FNBP1LQ5T0N5 605 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 EMC10Q5UCC4 262 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 FAM46CQ5VWP2 391 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 TRMT10CQ7L0Y3 403 aaKnown RBP23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 KDELC2Q7Z4H8 507 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 TMC3Q7Z5M5 1100 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 CHST14Q8NCH0 376 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 LPCAT1Q8NF37 534 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 ECHDC3Q96DC8 303 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 PCDHB9Q9Y5E1 797 aa23.75■■□□□ 1.39
TSPAN4-202ENST00000397396 F5P12259 2224 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 RNF40O75150 1001 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 DHX9Q08211 1270 aaKnown RBP23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 CAMK2GQ13555 558 aaPredicted RBP23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 IHHQ14623 411 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 C2orf27AQ580R0 203 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 SIRPB2Q5JXA9 342 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 IER5LQ5T953 404 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 DENND5AQ6IQ26 1287 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 ZBED8Q8IZ13 594 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 STK40Q8N2I9 435 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 SLC25A41Q8N5S1 370 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 ZNF366Q8N895 744 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 IL17RCQ8NAC3 791 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 GRIN3AQ8TCU5 1115 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 PYROXD1Q8WU10 500 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 ACOX2Q99424 681 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 HACD3Q9P035 362 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 DKK3Q9UBP4 350 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 PHTF1Q9UMS5 762 aa23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 NDRG2Q9UN36 371 aaKnown RBP23.74■■□□□ 1.39
TSPAN4-202ENST00000397396 KANSL1LA0AUZ9 987 aa23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 TSPAN11A1L157 253 aa23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 SHISA7A6NL88 538 aa23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 ANKRD66B4E2M5 251 aa23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 LEFTY1O75610 366 aa23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 KLF8O95600 359 aaPredicted RBP23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 UGT2B4P06133 528 aa23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 FAM153BP0C7A2 387 aa23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 CHRM1P11229 460 aaPredicted RBP23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 TSHRP16473 764 aa23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 MAGEA4P43358 317 aa23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 FAM153CQ494X1 144 aa23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 ZNF805Q5CZA5 627 aa23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 PPHLN1Q8NEY8 458 aaKnown RBP23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 LTB4R2Q9NPC1 389 aa23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 PRSS16Q9NQE7 514 aa23.73■■□□□ 1.39
TSPAN4-202ENST00000397396 SPAG6O75602 509 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 PRLP01236 227 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 HOXB2P14652 356 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 MGAT1P26572 445 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 GKP32189 559 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 CHRNA4P43681 627 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 SUOXP51687 545 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 PMS2P54278 862 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 OLIG2Q13516 323 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 GALNT3Q14435 633 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 ARSIQ5FYB1 569 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 PCID2Q5JVF3 399 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 CASC4Q6P4E1 433 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 USP45Q70EL2 814 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 SIX5Q8N196 739 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 MREGQ8N565 214 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 STAMBPL1Q96FJ0 436 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 NSMCE3Q96MG7 304 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 PWWP2AQ96N64 755 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 RANBP9Q96S59 729 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 EBNA1BP2Q99848 306 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 OSBPL6Q9BZF3 934 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 TRABDQ9H4I3 376 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 MTG2Q9H4K7 406 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 MRM3Q9HC36 420 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 DYRK4Q9NR20 520 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 PPM1HQ9ULR3 514 aa23.72■■□□□ 1.39
TSPAN4-202ENST00000397396 MAD1L1Q9Y6D9 718 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms