RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SLC12A1Q13621 1099 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 ZNF235Q14590 738 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 LBRQ14739 615 aaKnown RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 SPDYCQ5MJ68 293 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 EMC10Q5UCC4 262 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 PEAR1Q5VY43 1037 aaPredicted RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 SLC23A3Q6PIS1 610 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 LEKR1Q6ZMV7 388 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 CEP128Q6ZU80 1094 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 TMEFF1Q8IYR6 380 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 PPP1R2P1Q96PQ5 205 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 XPO6Q96QU8 1125 aaKnown RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 NUSAP1Q9BXS6 441 aaKnown RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 NT5MQ9NPB1 228 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 ABCB8Q9NUT2 735 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 GOLGA6AQ9NYA3 693 aa13.42□□□□□ -0.26
SEC13-209ENST00000397117 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
SEC13-209ENST00000397117 ANKRD11Q6UB99 2663 aaPredicted RBP13.41□□□□□ -0.26
SEC13-209ENST00000397117 DMXL2Q8TDJ6 3036 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 MAP3K13O43283 966 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 ADAM23O75077 832 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 KAT7O95251 611 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 PEX11BO96011 259 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 FAM153BP0C7A2 387 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 ENGP17813 658 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 NFKB1P19838 968 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 GLDCP23378 1020 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 CD70P32970 193 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 TIE1P35590 1138 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 TNFRSF4P43489 277 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 SLC10A7Q0GE19 358 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 SEMA5AQ13591 1074 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 RFTN1Q14699 578 aaPredicted RBP13.41□□□□□ -0.26
SEC13-209ENST00000397117 FAM153CQ494X1 144 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 SYCP2LQ5T4T6 812 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 PPP1R21Q6ZMI0 780 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 CCDC25Q86WR0 208 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 C12orf40Q86WS4 652 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 PHTF2Q8N3S3 785 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 NAT8LQ8N9F0 302 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 DCAF4L2Q8NA75 395 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 PRCCQ92733 491 aaPredicted RBP13.41□□□□□ -0.26
SEC13-209ENST00000397117 GDAP1L1Q96MZ0 367 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 SLC2A11Q9BYW1 496 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 FOXP3Q9BZS1 431 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 SLC32A1Q9H598 525 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 PDFQ9HBH1 243 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 GLOD4Q9HC38 313 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 POLMQ9NP87 494 aaPredicted RBP13.41□□□□□ -0.26
SEC13-209ENST00000397117 FAM153AQ9UHL3 310 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 PILRBQ9UKJ0 227 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 CLEC4EQ9ULY5 219 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 MSRB2Q9Y3D2 182 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 OR51B4Q9Y5P0 310 aa13.41□□□□□ -0.26
SEC13-209ENST00000397117 PCDH15Q96QU1 1955 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 NYNRINQ9P2P1 1898 aaKnown RBP13.4□□□□□ -0.26
SEC13-209ENST00000397117 GOLGA8MH3BSY2 632 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 TP73O15350 636 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 HOXC11O43248 304 aaPredicted RBP13.4□□□□□ -0.26
SEC13-209ENST00000397117 HYAL3O43820 417 aaPredicted RBP13.4□□□□□ -0.26
SEC13-209ENST00000397117 APODP05090 189 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 HLA-DQB2P05538 268 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 CD68P34810 354 aaPredicted RBP13.4□□□□□ -0.26
SEC13-209ENST00000397117 MAPK8P45983 427 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 GEMIN4P57678 1058 aaKnown RBP13.4□□□□□ -0.26
SEC13-209ENST00000397117 SARNPP82979 210 aaKnown RBP13.4□□□□□ -0.26
SEC13-209ENST00000397117 KCNJ11Q14654 390 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 EOGTQ5NDL2 527 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 ANKRD22Q5VYY1 191 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 RETSATQ6NUM9 610 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 KIAA1211LQ6NV74 962 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 ARMCX6Q7L4S7 300 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 APCDD1Q8J025 514 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 ZCCHC9Q8N567 271 aaKnown RBP13.4□□□□□ -0.26
SEC13-209ENST00000397117 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.4□□□□□ -0.26
SEC13-209ENST00000397117 TEX26Q8N6G2 289 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 CNTD1Q8N815 330 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 NAT16Q8N8M0 369 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 ZCCHC14Q8WYQ9 949 aaKnown RBP13.4□□□□□ -0.26
SEC13-209ENST00000397117 CAVIN3Q969G5 261 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 SPACA7Q96KW9 195 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 CINPQ9BW66 212 aaPredicted RBP13.4□□□□□ -0.26
SEC13-209ENST00000397117 SEPT3Q9UH03 358 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 VPS51Q9UID3 782 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 GGA2Q9UJY4 613 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 SHROOM3Q8TF72 1996 aa13.4□□□□□ -0.26
SEC13-209ENST00000397117 FAM221BA6H8Z2 402 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 SNAP91O60641 907 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 ANXA9O76027 345 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 TPSB2P20231 275 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 HLA-FP30511 346 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 GRIA2P42262 883 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 DPP6P42658 865 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 MAGEA6P43360 314 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 PLK1P53350 603 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 ARL4CP56559 192 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 CDK16Q00536 496 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 DHX9Q08211 1270 aaKnown RBP13.39□□□□□ -0.27
SEC13-209ENST00000397117 SLMAPQ14BN4 828 aa13.39□□□□□ -0.27
SEC13-209ENST00000397117 TPSAB1Q15661 275 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms