RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 C2orf27AQ580R0 203 aa9.18□□□□□ -0.94
CDH11-202ENST00000394156 PITRM1Q5JRX3 1037 aa9.18□□□□□ -0.94
CDH11-202ENST00000394156 MTSS1LQ765P7 747 aa9.18□□□□□ -0.94
CDH11-202ENST00000394156 PNPLA1Q8N8W4 532 aa9.18□□□□□ -0.94
CDH11-202ENST00000394156 FAR2Q96K12 515 aa9.18□□□□□ -0.94
CDH11-202ENST00000394156 H2AFY2Q9P0M6 372 aaPredicted RBP9.18□□□□□ -0.94
CDH11-202ENST00000394156 XPR1Q9UBH6 696 aa9.18□□□□□ -0.94
CDH11-202ENST00000394156 INVSQ9Y283 1065 aa9.18□□□□□ -0.94
CDH11-202ENST00000394156 ADAMTSL3P82987 1691 aa9.18□□□□□ -0.94
CDH11-202ENST00000394156 HS6ST1O60243 411 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 NDUFS2O75306 463 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 GLUD1P00367 558 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 HOXC6P09630 235 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 HSPA1AP0DMV8 641 aaKnown RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 HSPA1BP0DMV9 641 aaKnown RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 CCL5P13501 91 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 ZNF37AP17032 561 aaPredicted RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 ZNF7P17097 686 aaPredicted RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 RNF144AP50876 292 aaPredicted RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 AMPD2Q01433 879 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 LAMB3Q13751 1172 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 RALGPS2Q86X27 583 aaPredicted RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 PIWIL1Q96J94 861 aaKnown RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 SPATS2LQ9NUQ6 558 aaKnown RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 OPTCQ9UBM4 332 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 PCYOX1Q9UHG3 505 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 GTF2IRD1Q9UHL9 959 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 RGS5O15539 181 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 DUSP11O75319 330 aaKnown RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 THRAP10827 490 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 IMPDH2P12268 514 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 INHBEP58166 350 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 IL5RAQ01344 420 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 GRM2Q14416 872 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 XKR6Q5GH73 641 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 PCID2Q5JVF3 399 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 RETSATQ6NUM9 610 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 TRMT10BQ6PF06 316 aaKnown RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 EFL1Q7Z2Z2 1120 aaKnown RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 PACS2Q86VP3 889 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 GDPD5Q8WTR4 605 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 PLEKHA8Q96JA3 519 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 SLC39A8Q9C0K1 460 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 IL22Q9GZX6 179 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 SLC24A2Q9UI40 661 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 A0A0G2JN53 185 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 KANSL1LA0AUZ9 987 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 ZBTB14O43829 449 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 LRIG2O94898 1065 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 ZBTB11O95625 1053 aaPredicted RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 PTNP21246 168 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 FUT4P22083 530 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 TUSC3Q13454 348 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 INTS6LQ5JSJ4 861 aaKnown RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 DEPDC1Q5TB30 811 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 CES5AQ6NT32 575 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 C4orf22Q6V702 233 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 GLIS1Q8NBF1 620 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 ZNF395Q9H8N7 513 aaPredicted RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 MRPL40Q9NQ50 206 aaKnown RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 GIMAP4Q9NUV9 329 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 THAP1Q9NVV9 213 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 PTCH2Q9Y6C5 1203 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 SDK1Q7Z5N4 2213 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 J3KR12 359 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 BEST1O76090 585 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 FGBP02675 491 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 TIE1P35590 1138 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 IL2P60568 153 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 PCBP2Q15366 365 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDH11-202ENST00000394156 RNF44Q7L0R7 432 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 SELENOMQ8WWX9 145 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 FAM120BQ96EK7 910 aaKnown RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 TBATAQ96M53 351 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 ATG10Q9H0Y0 220 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 RIBC2Q9H4K1 309 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 PNMA8CA0A1B0GUJ8 204 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 MAP2K7O14733 419 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 NCAM2O15394 837 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 DAB1O75553 588 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 RNASEH2AO75792 299 aaKnown RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 CALB2P22676 271 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 RANBP1P43487 201 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 CCT8P50990 548 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 ZNF648Q5T619 568 aaPredicted RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 TXNDC8Q6A555 127 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 SYT12Q8IV01 421 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 SUGP1Q8IWZ8 645 aaKnown RBP9.17□□□□□ -0.94
CDH11-202ENST00000394156 OR4L1Q8NH43 312 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 BRD9Q9H8M2 597 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 COQ6Q9Y2Z9 468 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 SLC31A1O15431 190 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 TPST2O60704 377 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 TRIM13O60858 407 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 RASGRP1O95267 797 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 SERPINE1P05121 402 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 EPHX1P07099 455 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 KCNQ1P51787 676 aa9.17□□□□□ -0.94
CDH11-202ENST00000394156 SNRPD1P62314 119 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms