RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ZNRF3Q9ULT6 936 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 KLF11O14901 512 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 PGK2P07205 417 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 PIM1P11309 404 aaPredicted RBP7.68□□□□□ -1.18
VTI1A-201ENST00000393077 VEGFAP15692 232 aaPredicted RBP7.68□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF3P17036 446 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 KELP23276 732 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 SNRPD2P62316 118 aaKnown RBP7.68□□□□□ -1.18
VTI1A-201ENST00000393077 ERVK-8P63133 956 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 BST2Q10589 180 aaKnown RBP7.68□□□□□ -1.18
VTI1A-201ENST00000393077 SPP2Q13103 211 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 BTN1A1Q13410 526 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 POU6F1Q14863 301 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 XKRXQ6PP77 449 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 THAP5Q7Z6K1 395 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 GALNT13Q8IUC8 556 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 SLFN12Q8IYM2 578 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 C19orf18Q8NEA5 215 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 TESCQ96BS2 214 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 NARS2Q96I59 477 aaKnown RBP7.68□□□□□ -1.18
VTI1A-201ENST00000393077 PPP1R2P1Q96PQ5 205 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 NODALQ96S42 347 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 NPAS2Q99743 824 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 TSEN34Q9BSV6 310 aaKnown RBP7.68□□□□□ -1.18
VTI1A-201ENST00000393077 NUDT5Q9UKK9 219 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 SNX8Q9Y5X2 465 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 MYH4Q9Y623 1939 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 MRASO14807 208 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 PAPSS1O43252 624 aaPredicted RBP7.68□□□□□ -1.18
VTI1A-201ENST00000393077 NDUFB10O96000 172 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 ITGB3P05106 788 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 TM4SF1P30408 202 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 SLC7A1P30825 629 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 SLC15A1P46059 708 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 RPS9P46781 194 aaKnown RBP7.68□□□□□ -1.18
VTI1A-201ENST00000393077 MLLT6P55198 1093 aaPredicted RBP7.68□□□□□ -1.18
VTI1A-201ENST00000393077 B2MP61769 119 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 GABPAQ06546 454 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 ZMYND11Q15326 602 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 NFIL3Q16649 462 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 CACHD1Q5VU97 1274 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 TMEM236Q5W0B7 351 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 P3H2Q8IVL5 708 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 COLGALT2Q8IYK4 626 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 MPP5Q8N3R9 675 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 KCTD6Q8NC69 237 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 MCUQ8NE86 351 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 FBXL20Q96IG2 436 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 SERAC1Q96JX3 654 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 PPP1R16BQ96T49 567 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF577Q9BSK1 485 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 ANKRD60Q9BZ19 345 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 PCDHAC1Q9H158 963 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 DDX4Q9NQI0 724 aaKnown RBP7.68□□□□□ -1.18
VTI1A-201ENST00000393077 OLAHQ9NV23 265 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 ADAM30Q9UKF2 790 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 RNF11Q9Y3C5 154 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 KCPQ6ZWJ8 1503 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 DISP2A7MBM2 1401 aa7.68□□□□□ -1.18
VTI1A-201ENST00000393077 FAM208AQ9UK61 1670 aaKnown RBP7.68□□□□□ -1.18
VTI1A-201ENST00000393077 DDTLA6NHG4 134 aaPredicted RBP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 PLSCR1O15162 318 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 JRKO75564 520 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 BCAS2O75934 225 aaPredicted RBP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 CCNYL3P0C7X3 344 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 NPR3P17342 541 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 RPL17P18621 184 aaKnown RBP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 QARSP47897 775 aaKnown RBP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 AP2S1P53680 142 aaPredicted RBP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 RAB25P57735 213 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF33BQ06732 778 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 ALCAMQ13740 583 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 GADL1Q6ZQY3 521 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 THNSL1Q8IYQ7 743 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 FBXL13Q8NEE6 735 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 MMP19Q99542 508 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 MCMBPQ9BTE3 642 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 PDCD10Q9BUL8 212 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 GTPBP2Q9BX10 602 aaKnown RBP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 DHX33Q9H6R0 707 aaKnown RBP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 SPAG4Q9NPE6 437 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 DYRK4Q9NR20 520 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 PCDHAC2Q9Y5I4 1007 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF536O15090 1300 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 GTPBP10A4D1E9 387 aaKnown RBP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 EFCAB10A6NFE3 127 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 hCG_1984214I3L0E3 225 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 FAM189A1O60320 539 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 GMDSO60547 372 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 BCAS1O75363 584 aaPredicted RBP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 NDST3O95803 873 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 NR3C2P08235 984 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 TNNI3P19429 210 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 IMPDH1P20839 514 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 IDH3AP50213 366 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 HSPA14Q0VDF9 509 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 FAXCQ5TGI0 409 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 CATSPER4Q7RTX7 472 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 LINC00523Q86TU6 105 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 TRIM48Q8IWZ4 208 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms