RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 C2orf49Q9BVC5 232 aaPredicted RBP17.26■□□□□ 0.35
SGCB-201ENST00000381431 GATA5Q9BWX5 397 aaPredicted RBP17.26■□□□□ 0.35
SGCB-201ENST00000381431 OR56A5P0C7T3 313 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 HDCP19113 662 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 RALGDSQ12967 914 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 PRKG2Q13237 762 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 RINLQ6ZS11 566 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 CUZD1Q86UP6 607 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 PHACTR4Q8IZ21 702 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 DQX1Q8TE96 717 aaKnown RBP17.26■□□□□ 0.35
SGCB-201ENST00000381431 PIK3R5Q8WYR1 880 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 C7orf26Q96N11 449 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 CADM1Q9BY67 442 aaKnown RBP17.26■□□□□ 0.35
SGCB-201ENST00000381431 KRT84Q9NSB2 600 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 SELENONQ9NZV5 590 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 CACNG4Q9UBN1 327 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 TSC22D4Q9Y3Q8 395 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 ZNF541Q9H0D2 1346 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 ZBTB14O43829 449 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 VPS4BO75351 444 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 TP53BP2Q13625 1128 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 POM121L1PQ3SYA9 428 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 SLC39A4Q6P5W5 647 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 DRICH1Q6PGQ1 229 aaPredicted RBP17.26■□□□□ 0.35
SGCB-201ENST00000381431 MON1AQ86VX9 555 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 SYT12Q8IV01 421 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 BANPQ8N9N5 519 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 GRIN3AQ8TCU5 1115 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 KLHL25Q9H0H3 589 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 ULK1O75385 1050 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 GAD2Q05329 585 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 CCDC15Q0P6D6 951 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 FSTL4Q6MZW2 842 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 RHBDF2Q6PJF5 856 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 DET1Q7L5Y6 550 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 QKIQ96PU8 341 aaKnown RBP eCLIP17.25■□□□□ 0.35
SGCB-201ENST00000381431 FZD8Q9H461 694 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 SLC17A6Q9P2U8 582 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 TNPO3Q9Y5L0 923 aaKnown RBP17.25■□□□□ 0.35
SGCB-201ENST00000381431 RPL38P63173 70 aaKnown RBP17.25■□□□□ 0.35
SGCB-201ENST00000381431 ITIH5Q86UX2 942 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 SMIM35A0A1B0GVV1 85 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 C5orf60A6NFR6 353 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 CD3EAPO15446 510 aaKnown RBP17.25■□□□□ 0.35
SGCB-201ENST00000381431 FAM20BO75063 409 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 PTPN9P43378 593 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 ASPAP45381 313 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 TUSC3Q13454 348 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 ESRP1Q6NXG1 681 aaKnown RBP17.25■□□□□ 0.35
SGCB-201ENST00000381431 STK40Q8N2I9 435 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 ZNF358Q9NW07 568 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 DNMT3LQ9UJW3 386 aa17.25■□□□□ 0.35
SGCB-201ENST00000381431 MGRN1O60291 552 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 AP2A1O95782 977 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 OCM2P0CE71 109 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 OCMP0CE72 109 aaPredicted RBP17.24■□□□□ 0.35
SGCB-201ENST00000381431 CKBP12277 381 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 SERPINA4P29622 427 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 CCL23P55773 120 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 SMAD3P84022 425 aaKnown RBP17.24■□□□□ 0.35
SGCB-201ENST00000381431 TAF10Q12962 218 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 LRRC49Q8IUZ0 686 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 KBTBD2Q8IY47 623 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 UNC5BQ8IZJ1 945 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 UCMAQ8WVF2 138 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 PTCD3Q96EY7 689 aaKnown RBP17.24■□□□□ 0.35
SGCB-201ENST00000381431 FBXL18Q96ME1 805 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 AGAP2Q99490 1192 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 MINDY3Q9H8M7 445 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 FAM208AQ9UK61 1670 aaKnown RBP17.24■□□□□ 0.35
SGCB-201ENST00000381431 YJEFN3A6XGL0 299 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 PDZK1P1A8MUH7 402 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 PCDH8O95206 1070 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 DGKAP23743 735 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 KLRC2P26717 231 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 RPL5P46777 297 aaKnown RBP17.24■□□□□ 0.35
SGCB-201ENST00000381431 DUSP4Q13115 394 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 OR4L1Q8NH43 312 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 TBATAQ96M53 351 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 AGO3Q9H9G7 860 aaKnown RBP17.24■□□□□ 0.35
SGCB-201ENST00000381431 PLK2Q9NYY3 685 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 LEF1Q9UJU2 399 aaPredicted RBP17.24■□□□□ 0.35
SGCB-201ENST00000381431 GIT1Q9Y2X7 761 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 RGPD8O14715 1765 aaPredicted RBP17.24■□□□□ 0.35
SGCB-201ENST00000381431 BTBD19C9JJ37 291 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 NRP2O60462 931 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 ANXA5P08758 320 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 LPOP22079 712 aaPredicted RBP17.24■□□□□ 0.35
SGCB-201ENST00000381431 IDH2P48735 452 aaKnown RBP17.24■□□□□ 0.35
SGCB-201ENST00000381431 TTPAP49638 278 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 CLCNKBP51801 687 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 SLC7A5P2Q9GIP4 190 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 POLR1BQ9H9Y6 1135 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 TMPRSS4Q9NRS4 437 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 RCOR3Q9P2K3 495 aaPredicted RBP17.24■□□□□ 0.35
SGCB-201ENST00000381431 DOLKQ9UPQ8 538 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 DERAQ9Y315 318 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 A0A1W2PQH9 124 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 DHRS12A0PJE2 317 aa17.24■□□□□ 0.35
SGCB-201ENST00000381431 OGDHQ02218 1023 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms