RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PDFQ9HBH1 243 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 UBA2Q9UBT2 640 aaPredicted RBP17.04■□□□□ 0.32
SMN2-201ENST00000380741 COQ6Q9Y2Z9 468 aa17.04■□□□□ 0.32
SMN2-201ENST00000380741 LMO7DNF2Z398 122 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 RIOK3O14730 519 aaKnown RBP17.03■□□□□ 0.32
SMN2-201ENST00000380741 MUSKO15146 869 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 PRB1P04280 392 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 XPAP23025 273 aaPredicted RBP17.03■□□□□ 0.32
SMN2-201ENST00000380741 TPI1P60174 286 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 NCAPHQ15003 741 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 TMEM52BQ4KMG9 183 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 PERM1Q5SV97 790 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 C6orf132Q5T0Z8 1188 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 FAXCQ5TGI0 409 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 ACAD10Q6JQN1 1059 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 DNAAF5Q86Y56 855 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 SLC35F3Q8IY50 421 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 TBATAQ96M53 351 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 SLC13A1Q9BZW2 595 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 CLPBQ9H078 707 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 LRRC19Q9H756 370 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 GPATCH2LQ9NWQ4 482 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 TAS2R14Q9NYV8 317 aa17.03■□□□□ 0.32
SMN2-201ENST00000380741 A0A1W2PNU3 283 aaPredicted RBP17.02■□□□□ 0.32
SMN2-201ENST00000380741 TSPAN11A1L157 253 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 J3KR12 359 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 TOR1BO14657 336 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 CASC3O15234 703 aaKnown RBP17.02■□□□□ 0.32
SMN2-201ENST00000380741 ANXA6P08133 673 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 CELA2BP08218 269 aaPredicted RBP17.02■□□□□ 0.32
SMN2-201ENST00000380741 TSHRP16473 764 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 FERP16591 822 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 CXADRP78310 365 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 PPARDQ03181 441 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 ELP6Q0PNE2 266 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 LRRC14Q15048 493 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 UGP2Q16851 508 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 C3orf38Q5JPI3 329 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 GPR155Q7Z3F1 870 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 HCAR2Q8TDS4 363 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 SLC39A7Q92504 469 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 ATXN7L3BQ96GX2 97 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 CELF6Q96J87 481 aaKnown RBP17.02■□□□□ 0.32
SMN2-201ENST00000380741 SYT11Q9BT88 431 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 SUV39H2Q9H5I1 410 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 PCDH12Q9NPG4 1184 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 ASCL3Q9NQ33 180 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 AP4E1Q9UPM8 1137 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 SATB2Q9UPW6 733 aa17.02■□□□□ 0.32
SMN2-201ENST00000380741 HELZ2Q9BYK8 2649 aaKnown RBP17.01■□□□□ 0.31
SMN2-201ENST00000380741 ATXN7O15265 892 aaPredicted RBP17.01■□□□□ 0.31
SMN2-201ENST00000380741 YY2O15391 372 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 ATMINO43313 823 aaPredicted RBP17.01■□□□□ 0.31
SMN2-201ENST00000380741 PRAMEF11O60813 436 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 CCDC172P0C7W6 258 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 ATP1A3P13637 1013 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 C6P13671 934 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 DESP17661 470 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 HTR7P34969 479 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 RPIAP49247 311 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 SUOXP51687 545 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 NDST2P52849 883 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 ERVPABLB-1P60509 514 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 MAMLD1Q13495 774 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 CA9Q16790 459 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 WSCD2Q2TBF2 565 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 RBM44Q6ZP01 1051 aaKnown RBP17.01■□□□□ 0.31
SMN2-201ENST00000380741 IRF2BP2Q7Z5L9 587 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 TPCN2Q8NHX9 752 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 GLMNQ92990 594 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 ENTPD2Q9Y5L3 495 aa17.01■□□□□ 0.31
SMN2-201ENST00000380741 CFAP46Q8IYW2 2715 aa17■□□□□ 0.31
SMN2-201ENST00000380741 TEX51A0A1B0GUA7 166 aa17■□□□□ 0.31
SMN2-201ENST00000380741 TMCO5BA8MYB1 307 aa17■□□□□ 0.31
SMN2-201ENST00000380741 EEF2KO00418 725 aaKnown RBP17■□□□□ 0.31
SMN2-201ENST00000380741 BUB1BO60566 1050 aaPredicted RBP17■□□□□ 0.31
SMN2-201ENST00000380741 TCEA3O75764 348 aa17■□□□□ 0.31
SMN2-201ENST00000380741 PSMA2P25787 234 aa17■□□□□ 0.31
SMN2-201ENST00000380741 RGRP47804 291 aa17■□□□□ 0.31
SMN2-201ENST00000380741 LIG3P49916 1009 aa17■□□□□ 0.31
SMN2-201ENST00000380741 PEX5P50542 639 aa17■□□□□ 0.31
SMN2-201ENST00000380741 PAPOLAP51003 745 aaKnown RBP17■□□□□ 0.31
SMN2-201ENST00000380741 BLKP51451 505 aa17■□□□□ 0.31
SMN2-201ENST00000380741 HK3P52790 923 aa17■□□□□ 0.31
SMN2-201ENST00000380741 GRM3Q14832 879 aa17■□□□□ 0.31
SMN2-201ENST00000380741 TCEA2Q15560 299 aa17■□□□□ 0.31
SMN2-201ENST00000380741 CFAP58Q5T655 872 aa17■□□□□ 0.31
SMN2-201ENST00000380741 ERAP2Q6P179 960 aa17■□□□□ 0.31
SMN2-201ENST00000380741 NYAP1Q6ZVC0 841 aa17■□□□□ 0.31
SMN2-201ENST00000380741 ZSWIM9Q86XI8 627 aa17■□□□□ 0.31
SMN2-201ENST00000380741 CAMK1DQ8IU85 385 aa17■□□□□ 0.31
SMN2-201ENST00000380741 HID1Q8IV36 788 aa17■□□□□ 0.31
SMN2-201ENST00000380741 NAT6Q93015 286 aa17■□□□□ 0.31
SMN2-201ENST00000380741 TSACCQ96A04 125 aaPredicted RBP17■□□□□ 0.31
SMN2-201ENST00000380741 GRAMD1AQ96CP6 724 aa17■□□□□ 0.31
SMN2-201ENST00000380741 VCPIP1Q96JH7 1222 aa17■□□□□ 0.31
SMN2-201ENST00000380741 ZNF641Q96N77 438 aaPredicted RBP17■□□□□ 0.31
SMN2-201ENST00000380741 GBP4Q96PP9 640 aa17■□□□□ 0.31
SMN2-201ENST00000380741 PEBP4Q96S96 227 aa17■□□□□ 0.31
SMN2-201ENST00000380741 CCDC3Q9BQI4 270 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms