RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 BEX3Q00994 111 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 KCNJ8Q15842 424 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 HABP4Q5JVS0 413 aaKnown RBP12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 GRTP1Q5TC63 336 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 GPR107Q5VW38 600 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 CLEC6AQ6EIG7 209 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 DCLRE1AQ6PJP8 1040 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 OR6J1Q8NGC5 347 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 TBC1D15Q8TC07 691 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 HPS1Q92902 700 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 FICDQ9BVA6 458 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 FBRSL1Q9HCM7 1045 aaKnown RBP12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 STAP1Q9ULZ2 295 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 MSI1O43347 362 aaKnown RBP12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 IL1BP01584 269 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 MT-ND1P03886 318 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 AGKQ53H12 422 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 ZNF789Q5FWF6 425 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 IL23RQ5VWK5 629 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 ZNF470Q6ECI4 717 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 NIPAL1Q6NVV3 410 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 SLC27A1Q6PCB7 646 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 EXOC8Q8IYI6 725 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 WNT8BQ93098 351 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 C16orf70Q9BSU1 422 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 CPA4Q9UI42 421 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 POU2F3Q9UKI9 436 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 AURKCQ9UQB9 309 aa12.57□□□□□ -0.4
PRPF40B-202ENST00000380281 HDAC3O15379 428 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 CKMT2P17540 419 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 S100A1P23297 94 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 CNTFP26441 200 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 PRDX6P30041 224 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 GRM5P41594 1212 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 PCYT1AP49585 367 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 TAF6P49848 677 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 PLIN5Q00G26 463 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 PRPSAP1Q14558 356 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 MARCH8Q5T0T0 291 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 POTEAQ6S8J7 498 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 VASH1Q7L8A9 365 aaPredicted RBP12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 SETD3Q86TU7 594 aaPredicted RBP12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 TICAM1Q8IUC6 712 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 OR6P1Q8NGX9 317 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 TAMM41Q96BW9 452 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 RMND5BQ96G75 393 aaPredicted RBP12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 CIB1Q99828 191 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 PAAF1Q9BRP4 392 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 SLC2A11Q9BYW1 496 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 WDCPQ9H6R7 721 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 UTP6Q9NYH9 597 aaKnown RBP12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 NCKIPSDQ9NZQ3 722 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 MPP6Q9NZW5 540 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 CDYLQ9Y232 598 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 MYRFQ9Y2G1 1151 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 PTGDR2Q9Y5Y4 395 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 KRBA1A5PL33 1030 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 FZD9O00144 591 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 DLX3O60479 287 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 ALDH1A2O94788 518 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 PIRTP0C851 137 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 LILRA4P59901 499 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 PTK2BQ14289 1009 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 INAQ16352 499 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 CHERPQ8IWX8 916 aaKnown RBP12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 SLC15A4Q8N697 577 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 KLHL32Q96NJ5 620 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 CEP44Q9C0F1 390 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 EHD1Q9H4M9 534 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 COQ10BQ9H8M1 238 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 OLAHQ9NV23 265 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 DNAJC28Q9NX36 388 aa12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.56□□□□□ -0.4
PRPF40B-202ENST00000380281 AQP9O43315 295 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 LRIG2O94898 1065 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 YWHAQP27348 245 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 GABRB3P28472 473 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 ARL1P40616 181 aaPredicted RBP12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 IREB2P48200 963 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 HARS2P49590 506 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 NEK2P51955 445 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 RGS21Q2M5E4 152 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 LDLRAP1Q5SW96 308 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 RBM20Q5T481 1227 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 SDHAF4Q5VUM1 108 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 OTUD1Q5VV17 481 aaPredicted RBP12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 KIAA0319Q5VV43 1072 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 LRRC8EQ6NSJ5 796 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 TIFABQ6ZNK6 161 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 CLEC20AQ6ZU45 233 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 TFAP2DQ7Z6R9 452 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 Q8N9G6 341 aaPredicted RBP12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 ADCY4Q8NFM4 1077 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 LRTOMTQ8WZ04 291 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 VPS33BQ9H267 617 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 POMKQ9H5K3 350 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 GIN1Q9NXP7 522 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 SFMBT1Q9UHJ3 866 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 USP3Q9Y6I4 520 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 C1orf232A0A0U1RR37 186 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms