RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ARCN1P48444 511 aaKnown RBP20.73■□□□□ 0.91
TMEFF1-201ENST00000374879 POLD3Q15054 466 aaPredicted RBP20.73■□□□□ 0.91
TMEFF1-201ENST00000374879 TMTC4Q5T4D3 741 aa20.73■□□□□ 0.91
TMEFF1-201ENST00000374879 FAM102AQ5T9C2 384 aaPredicted RBP20.73■□□□□ 0.91
TMEFF1-201ENST00000374879 ZYG11AQ6WRX3 759 aa20.73■□□□□ 0.91
TMEFF1-201ENST00000374879 CDKL3Q8IVW4 592 aaPredicted RBP20.73■□□□□ 0.91
TMEFF1-201ENST00000374879 HDAC10Q969S8 669 aa20.73■□□□□ 0.91
TMEFF1-201ENST00000374879 TXNDC15Q96J42 360 aa20.73■□□□□ 0.91
TMEFF1-201ENST00000374879 MUS81Q96NY9 551 aa20.73■□□□□ 0.91
TMEFF1-201ENST00000374879 FCRL3Q96P31 734 aaPredicted RBP20.73■□□□□ 0.91
TMEFF1-201ENST00000374879 CLSTN3Q9BQT9 956 aa20.73■□□□□ 0.91
TMEFF1-201ENST00000374879 TBC1D13Q9NVG8 400 aa20.73■□□□□ 0.91
TMEFF1-201ENST00000374879 VWA7Q9Y334 891 aa20.73■□□□□ 0.91
TMEFF1-201ENST00000374879 FIS1Q9Y3D6 152 aa20.73■□□□□ 0.91
TMEFF1-201ENST00000374879 AXIN1O15169 862 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 MPOP05164 745 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 CCND2P30279 289 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 AXLP30530 894 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 LRPAP1P30533 357 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 RPS9P46781 194 aaKnown RBP20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 GLRBP48167 497 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 ZNF143P52747 638 aaPredicted RBP20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 LIMK2P53671 638 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 SLC13A2Q13183 592 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 SWSAP1Q6NVH7 229 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 RDM1Q8NG50 284 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 HTRA1Q92743 480 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 HDAC11Q96DB2 347 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 ZBED3Q96IU2 234 aaPredicted RBP20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 MAELQ96JY0 434 aaKnown RBP20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 FTHL17Q9BXU8 183 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 NEK6Q9HC98 313 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 ABCB7O75027 752 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 NR3C2P08235 984 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 HTR1BP28222 390 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 ADARB1P78563 741 aaKnown RBP20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 TFAP2DQ7Z6R9 452 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 C11orf74Q86VG3 221 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 VSIG10LQ86VR7 867 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 ARMC8Q8IUR7 673 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 ANKK1Q8NFD2 765 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 CXorf38Q8TB03 319 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 RXFP2Q8WXD0 754 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 VMP1Q96GC9 406 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 C17orf80Q9BSJ5 609 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 MSTO1Q9BUK6 570 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 NIF3L1Q9GZT8 377 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 SEPT9Q9UHD8 586 aaPredicted RBP20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 ADAM28Q9UKQ2 775 aa20.72■□□□□ 0.91
TMEFF1-201ENST00000374879 KMOO15229 486 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 GRAP2O75791 330 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 C7P10643 843 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 CCDC58Q4VC31 144 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 UBE2UQ5VVX9 321 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 NIM1KQ8IY84 436 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 ANKRD52Q8NB46 1076 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 ATG4CQ96DT6 458 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 LRCH3Q96II8 777 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 SLC45A3Q96JT2 553 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 DGCR6LQ9BY27 220 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 LHX5Q9H2C1 402 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 RNF146Q9NTX7 359 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 MORF4L1Q9UBU8 362 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 PRELID1Q9Y255 219 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 UGT2B11O75310 529 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 DGAT1O75907 488 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 STBD1O95210 358 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 SNRPB2P08579 225 aaKnown RBP20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 COPZ1P61923 177 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 C8orf82Q6P1X6 216 aaPredicted RBP20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 PRR23BQ6ZRT6 265 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 LINC00523Q86TU6 105 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 STON2Q8WXE9 905 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 TP53INP1Q96A56 240 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 ZUFSPQ96AP4 578 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 MCRS1Q96EZ8 462 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 MYOZ2Q9NPC6 264 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 STYXL1Q9Y6J8 313 aa20.71■□□□□ 0.91
TMEFF1-201ENST00000374879 CENPBD1B2RD01 187 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 VWA5AO00534 786 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 HOXC11O43248 304 aaPredicted RBP20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 MLNP12872 115 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 PDGFRAP16234 1089 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 GPD1P21695 349 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 PSMA4P25789 261 aaKnown RBP20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 SHMT2P34897 504 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 CXCL9Q07325 125 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 MAPRE2Q15555 327 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 ZIK1Q3SY52 487 aaPredicted RBP20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 SPARTQ8N0X7 666 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 SCML4Q8N228 414 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 CCNYL1Q8N7R7 359 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 MCPH1Q8NEM0 835 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 OR9I1Q8NGQ6 314 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 GPRASP2Q96D09 838 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 CNPY3Q9BT09 278 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 MTMR12Q9C0I1 747 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 ENPP5Q9UJA9 477 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 SNPHO15079 494 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 ASNA1O43681 348 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms