RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 SUOXP51687 545 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 OTUD4Q01804 1114 aaKnown RBP16.12■□□□□ 0.17
HDHD3-202ENST00000374180 ZBTB17Q13105 803 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 XRCC4Q13426 336 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 SF3A2Q15428 464 aaKnown RBP16.12■□□□□ 0.17
HDHD3-202ENST00000374180 UGP2Q16851 508 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 TRIM61Q5EBN2 209 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 LRRC73Q5JTD7 316 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 SEL1L2Q5TEA6 688 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 HORMAD1Q86X24 394 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 KIAA2013Q8IYS2 634 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 ZCCHC9Q8N567 271 aaKnown RBP16.12■□□□□ 0.17
HDHD3-202ENST00000374180 CNTD1Q8N815 330 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 C12orf50Q8NA57 414 aaPredicted RBP16.12■□□□□ 0.17
HDHD3-202ENST00000374180 ACTL9Q8TC94 416 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 PDCD6IPQ8WUM4 868 aaKnown RBP16.12■□□□□ 0.17
HDHD3-202ENST00000374180 AGAP3Q96P47 875 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 CEP41Q9BYV8 373 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 PI4KAP42356 2102 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 A0A1B0GTW7 788 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 A0A1W2PQ67 120 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 UPK3BL1B0FP48 263 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 PRR5-ARHGAP8B1AHC4 643 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 UPK3BL2E5RIL1 263 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 BCAT2O15382 392 aaPredicted RBP16.11■□□□□ 0.17
HDHD3-202ENST00000374180 RPS21P63220 83 aaKnown RBP16.11■□□□□ 0.17
HDHD3-202ENST00000374180 DSC2Q02487 901 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 NOMO1Q15155 1222 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 TEX44Q53QW1 395 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 SLC45A4Q5BKX6 768 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 ALG1LQ6GMV1 187 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 SLC23A3Q6PIS1 610 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 PRR23CQ6ZRP0 262 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 ZSWIM9Q86XI8 627 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 C1orf216Q8TAB5 229 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 ECHDC3Q96DC8 303 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 QKIQ96PU8 341 aaKnown RBP eCLIP16.11■□□□□ 0.17
HDHD3-202ENST00000374180 FERMT1Q9BQL6 677 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 NUSAP1Q9BXS6 441 aaKnown RBP16.11■□□□□ 0.17
HDHD3-202ENST00000374180 EBF2Q9HAK2 575 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 SLC6A14Q9UN76 642 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 ITM2BQ9Y287 266 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 PCDHB9Q9Y5E1 797 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 KNL1Q8NG31 2342 aa16.11■□□□□ 0.17
HDHD3-202ENST00000374180 KCNK3O14649 394 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 AREL1O15033 823 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 HTRA2O43464 458 aaPredicted RBP16.1■□□□□ 0.17
HDHD3-202ENST00000374180 SERPINF2P08697 491 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 ITIH2P19823 946 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
HDHD3-202ENST00000374180 NUDT1P36639 197 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 EIF3EP60228 445 aaKnown RBP16.1■□□□□ 0.17
HDHD3-202ENST00000374180 IRX4P78413 519 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 ELP6Q0PNE2 266 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 SETMARQ53H47 684 aaPredicted RBP16.1■□□□□ 0.17
HDHD3-202ENST00000374180 SEL1L3Q68CR1 1132 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 TCEAL6Q6IPX3 200 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 KIAA1161Q6NSJ0 714 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 ERAP2Q6P179 960 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 TTC13Q8NBP0 860 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 ARRDC2Q8TBH0 407 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 HTR3CQ8WXA8 447 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 KLK6Q92876 244 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 TCEAL3Q969E4 200 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 SERAC1Q96JX3 654 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 ORAI3Q9BRQ5 295 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 TLR10Q9BXR5 811 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 CARD9Q9H257 536 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 PCDH12Q9NPG4 1184 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 ZFR2Q9UPR6 939 aaKnown RBP16.1■□□□□ 0.17
HDHD3-202ENST00000374180 RAI2Q9Y5P3 530 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 SLCO1B1Q9Y6L6 691 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 SLC31A1O15431 190 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 SPINT1O43278 529 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 RBP3P10745 1247 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 PTPN3P26045 913 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 AFF3P51826 1226 aaKnown RBP16.1■□□□□ 0.17
HDHD3-202ENST00000374180 RACK1P63244 317 aaKnown RBP16.1■□□□□ 0.17
HDHD3-202ENST00000374180 FAM193AP78312 1265 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 NIPAL4Q0D2K0 466 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 TRAF2Q12933 501 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 SGCGQ13326 291 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 KLF1Q13351 362 aaPredicted RBP16.1■□□□□ 0.17
HDHD3-202ENST00000374180 ZNF284Q2VY69 593 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 ZNF569Q5MCW4 686 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 FAM182AQ5T1J6 154 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 ARMC12Q5T9G4 340 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 DARS2Q6PI48 645 aaKnown RBP16.1■□□□□ 0.17
HDHD3-202ENST00000374180 ZSCAN30Q86W11 494 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 SPOCK2Q92563 424 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 TEKT5Q96M29 485 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 FAM118BQ9BPY3 351 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 TM9SF3Q9HD45 589 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 GGT7Q9UJ14 662 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 DMTF1Q9Y222 760 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 JRKLQ9Y4A0 524 aa16.1■□□□□ 0.17
HDHD3-202ENST00000374180 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.1■□□□□ 0.17
HDHD3-202ENST00000374180 DMXL1Q9Y485 3027 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 TNRC6BQ9UPQ9 1833 aaKnown RBP16.09■□□□□ 0.17
HDHD3-202ENST00000374180 TCRBV7S2A1N4TA0A589 114 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms