RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ACVR1CQ8NER5 493 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 VN1R2Q8NFZ6 395 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 GDPD5Q8WTR4 605 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 SMG7Q92540 1137 aaKnown RBP17.66■□□□□ 0.42
SSBP3-203ENST00000371319 SPOCK2Q92563 424 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 ACDQ96AP0 544 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 ATXN7L3BQ96GX2 97 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 VPS39Q96JC1 886 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 SEC16BQ96JE7 1060 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 FAM167BQ9BTA0 163 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 NSRP1Q9H0G5 558 aaKnown RBP17.66■□□□□ 0.42
SSBP3-203ENST00000371319 VPS11Q9H270 941 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 LINC00597Q9H2U6 94 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 RHOJQ9H4E5 214 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 SNX15Q9NRS6 342 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 SPO11Q9Y5K1 396 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 C2orf16Q68DN1 1984 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 MYOFQ9NZM1 2061 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 EPOPA6NHQ4 379 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 SMAD6O43541 496 aaKnown RBP17.65■□□□□ 0.42
SSBP3-203ENST00000371319 TOP3BO95985 862 aaKnown RBP17.65■□□□□ 0.42
SSBP3-203ENST00000371319 AHSGP02765 367 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 SLC1A2P43004 574 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 NRIP1P48552 1158 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 SERPINB8P50452 374 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 CSRP3P50461 194 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 ARSDP51689 593 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 HNRNPH2P55795 449 aaKnown RBP17.65■□□□□ 0.42
SSBP3-203ENST00000371319 KCNC3Q14003 757 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 GRM3Q14832 879 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 PITRM1Q5JRX3 1037 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 RALGPS1Q5JS13 557 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 ATXN7L2Q5T6C5 722 aaPredicted RBP17.65■□□□□ 0.42
SSBP3-203ENST00000371319 ASTLQ6HA08 431 aaPredicted RBP17.65■□□□□ 0.42
SSBP3-203ENST00000371319 NEPROQ6NW34 567 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 CMC1Q7Z7K0 106 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 SRLQ86TD4 932 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 BRSK1Q8TDC3 778 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 BLOC1S5Q8TDH9 187 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 ZNF75CPQ92670 426 aaPredicted RBP17.65■□□□□ 0.42
SSBP3-203ENST00000371319 GPR22Q99680 433 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 IQCGQ9H095 443 aaKnown RBP17.65■□□□□ 0.42
SSBP3-203ENST00000371319 ABCB8Q9NUT2 735 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.65■□□□□ 0.422e-7■□□□□ 10.3
SSBP3-203ENST00000371319 MRPS23Q9Y3D9 190 aaKnown RBP17.65■□□□□ 0.42
SSBP3-203ENST00000371319 PCDHGC4Q9Y5F7 938 aa17.65■□□□□ 0.42
SSBP3-203ENST00000371319 LAMA2P24043 3122 aaKnown RBP17.64■□□□□ 0.41
SSBP3-203ENST00000371319 WDR91A4D1P6 747 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 PDHA1P08559 390 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 PIRTP0C851 137 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 TYK2P29597 1187 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 SERPINB4P48594 390 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 CTBP1Q13363 440 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 SLC12A1Q13621 1099 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 LAMB3Q13751 1172 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 CBX2Q14781 532 aaPredicted RBP17.64■□□□□ 0.41
SSBP3-203ENST00000371319 ZKSCAN8Q15776 578 aaPredicted RBP17.64■□□□□ 0.41
SSBP3-203ENST00000371319 PPM1JQ5JR12 505 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 GKAP1Q5VSY0 366 aaPredicted RBP17.64■□□□□ 0.41
SSBP3-203ENST00000371319 CGB2Q6NT52 195 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 ARID3BQ8IVW6 561 aaPredicted RBP17.64■□□□□ 0.41
SSBP3-203ENST00000371319 LRRC8CQ8TDW0 803 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 PTPRN2Q92932 1015 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 IRF7Q92985 503 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 MFSD1Q9H3U5 465 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 PIDD1Q9HB75 910 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 TBC1D14Q9P2M4 693 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 EMCNQ9ULC0 261 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 RIMKLBQ9ULI2 386 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 ARL5AQ9Y689 179 aa17.64■□□□□ 0.41
SSBP3-203ENST00000371319 CCL22O00626 93 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 SLC7A4O43246 635 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 GLRA3O75311 464 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 HLA-FP30511 346 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 CTSOP43234 321 aaPredicted RBP17.63■□□□□ 0.41
SSBP3-203ENST00000371319 PTPRCAPQ14761 206 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 UGP2Q16851 508 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 FUT11Q495W5 492 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 ZNF470Q6ECI4 717 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 LPCAT1Q8NF37 534 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 PEX13Q92968 403 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 HDAC10Q969S8 669 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 DNAJC1Q96KC8 554 aaKnown RBP17.63■□□□□ 0.41
SSBP3-203ENST00000371319 ELAC2Q9BQ52 826 aaKnown RBP17.63■□□□□ 0.41
SSBP3-203ENST00000371319 CAB39LQ9H9S4 337 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 SPHK2Q9NRA0 654 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 CHD7Q9P2D1 2997 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 FBXO5Q9UKT4 447 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 WNT6Q9Y6F9 365 aa17.63■□□□□ 0.41
SSBP3-203ENST00000371319 CHD9Q3L8U1 2897 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 CXorf51AA0A1B0GTR3 108 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.62■□□□□ 0.41
SSBP3-203ENST00000371319 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.62■□□□□ 0.41
SSBP3-203ENST00000371319 NEDD8-MDP1E9PL57 170 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 FZD6O60353 706 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 ZNF821O75541 412 aaPredicted RBP17.62■□□□□ 0.41
SSBP3-203ENST00000371319 MPOP05164 745 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 WEE1P30291 646 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 GMPRP36959 345 aa17.62■□□□□ 0.41
SSBP3-203ENST00000371319 HADHAP40939 763 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms