RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 ASCL3Q9NQ33 180 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 DKK3Q9UBP4 350 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 APOBEC3BQ9UH17 382 aaKnown RBP13.3□□□□□ -0.28
RPF1-201ENST00000370654 RABGEF1Q9UJ41 708 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 SALL4Q9UJQ4 1053 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 ZSCAN5CA6NGD5 496 aaPredicted RBP13.29□□□□□ -0.28
RPF1-201ENST00000370654 TSHRP16473 764 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 LSSP48449 732 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 PAPOLAP51003 745 aaKnown RBP13.29□□□□□ -0.28
RPF1-201ENST00000370654 DUSP3P51452 185 aaPredicted RBP13.29□□□□□ -0.28
RPF1-201ENST00000370654 THOP1P52888 689 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 YBEYP58557 167 aaPredicted RBP13.29□□□□□ -0.28
RPF1-201ENST00000370654 MAMLD1Q13495 774 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 FAXCQ5TGI0 409 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 SFTPA2Q8IWL1 248 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 ARHGAP12Q8IWW6 846 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 AOPEPQ8N6M6 819 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 NPWQ8N729 165 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 KCTD15Q96SI1 283 aaPredicted RBP13.29□□□□□ -0.28
RPF1-201ENST00000370654 IL12RB2Q99665 862 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 CPEB1Q9BZB8 566 aaKnown RBP13.29□□□□□ -0.28
RPF1-201ENST00000370654 ABCG4Q9H172 646 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 ANO10Q9NW15 660 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 SPASTQ9UBP0 616 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 UBA2Q9UBT2 640 aaPredicted RBP13.29□□□□□ -0.28
RPF1-201ENST00000370654 PCSK1NQ9UHG2 260 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 SATB2Q9UPW6 733 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 DAAM1Q9Y4D1 1078 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 OR1A2Q9Y585 309 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 ENTPD2Q9Y5L3 495 aa13.29□□□□□ -0.28
RPF1-201ENST00000370654 TSPAN11A1L157 253 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 TTC24A2A3L6 582 aaPredicted RBP13.28□□□□□ -0.28
RPF1-201ENST00000370654 TPP1O14773 563 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 LZTS3O60299 673 aaPredicted RBP13.28□□□□□ -0.28
RPF1-201ENST00000370654 PRAMEF11O60813 436 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 ZIC2O95409 532 aaPredicted RBP13.28□□□□□ -0.28
RPF1-201ENST00000370654 C6P13671 934 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 GM2AP17900 193 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 TPI1P60174 286 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 CXADRP78310 365 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 NR0B2Q15466 257 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 STX1AQ16623 288 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 UGP2Q16851 508 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 ALG11Q2TAA5 492 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 PARP15Q460N3 678 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 C3orf38Q5JPI3 329 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 DCUN1D2Q6PH85 259 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 SASS6Q6UVJ0 657 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 MACC1Q6ZN28 852 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 ZSCAN30Q86W11 494 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 PELI3Q8N2H9 469 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 PLA2G15Q8NCC3 412 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 TSEN2Q8NCE0 465 aaKnown RBP13.28□□□□□ -0.28
RPF1-201ENST00000370654 CASKIN2Q8WXE0 1202 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 UBL7Q96S82 380 aaPredicted RBP13.28□□□□□ -0.28
RPF1-201ENST00000370654 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.28□□□□□ -0.28
RPF1-201ENST00000370654 SNRNP25Q9BV90 132 aaKnown RBP13.28□□□□□ -0.28
RPF1-201ENST00000370654 SUV39H2Q9H5I1 410 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 POLR1BQ9H9Y6 1135 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 USP29Q9HBJ7 922 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 CPNE5Q9HCH3 593 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 AP4E1Q9UPM8 1137 aa13.28□□□□□ -0.28
RPF1-201ENST00000370654 LRP4O75096 1905 aa13.27□□□□□ -0.28
RPF1-201ENST00000370654 LMO7DNF2Z398 122 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 RIOK3O14730 519 aaKnown RBP13.27□□□□□ -0.29
RPF1-201ENST00000370654 ATXN7O15265 892 aaPredicted RBP13.27□□□□□ -0.29
RPF1-201ENST00000370654 DXOO77932 396 aaKnown RBP13.27□□□□□ -0.29
RPF1-201ENST00000370654 FERP16591 822 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 CDK11BP21127 795 aaKnown RBP13.27□□□□□ -0.29
RPF1-201ENST00000370654 YPEL5P62699 121 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 PPARDQ03181 441 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 RAD51Q06609 339 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 RALGDSQ12967 914 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 INPP5AQ14642 412 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 C6orf132Q5T0Z8 1188 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 AFMIDQ63HM1 303 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 PLEKHA7Q6IQ23 1121 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 HID1Q8IV36 788 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 KYQ8NBH2 561 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 PCDH19Q8TAB3 1148 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 SLC39A7Q92504 469 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 ARHGEF26Q96DR7 871 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 VCPIP1Q96JH7 1222 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 ZNF578Q96N58 590 aaPredicted RBP13.27□□□□□ -0.29
RPF1-201ENST00000370654 LGMNQ99538 433 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 DHX35Q9H5Z1 703 aaKnown RBP13.27□□□□□ -0.29
RPF1-201ENST00000370654 CATSPERBQ9H7T0 1116 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 SIRPGQ9P1W8 387 aa13.27□□□□□ -0.29
RPF1-201ENST00000370654 MGAQ8IWI9 3026 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 TMEM191CA6NGB0 347 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 LRRC53A6NM62 1247 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 A8MX80 341 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 EEF2KO00418 725 aaKnown RBP13.26□□□□□ -0.29
RPF1-201ENST00000370654 FGF10O15520 208 aaPredicted RBP13.26□□□□□ -0.29
RPF1-201ENST00000370654 PCCBP05166 539 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 ANXA6P08133 673 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 TCF4P15884 667 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 ERCC2P18074 760 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 TNFAIP3P21580 790 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 PSMA2P25787 234 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms