RNA–Protein interactions for RNA: ENST00000365560.1

RNA5SP88-201, Transcript of RNA, 5S ribosomal pseudogene 88, humanhuman

BASIC

Gene RNA5SP88, Length 109 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP88-201ENST00000365560 CPLX2Q6PUV4 134 aaKnown RBP4.06□□□□□ -1.76
RNA5SP88-201ENST00000365560 R3HCC1LQ7Z5L2 792 aaKnown RBP4.06□□□□□ -1.76
RNA5SP88-201ENST00000365560 MB21D2Q8IYB1 491 aaPredicted RBP4.06□□□□□ -1.76
RNA5SP88-201ENST00000365560 MIGA1Q8NAN2 632 aa4.06□□□□□ -1.76
RNA5SP88-201ENST00000365560 B4GALNT2Q8NHY0 566 aa4.06□□□□□ -1.76
RNA5SP88-201ENST00000365560 KLHL29Q96CT2 875 aa4.06□□□□□ -1.76
RNA5SP88-201ENST00000365560 ZC3HAV1LQ96H79 300 aaKnown RBP4.06□□□□□ -1.76
RNA5SP88-201ENST00000365560 MPP4Q96JB8 637 aa4.06□□□□□ -1.76
RNA5SP88-201ENST00000365560 NR1H4Q96RI1 486 aaPredicted RBP4.06□□□□□ -1.76
RNA5SP88-201ENST00000365560 NAP1L4Q99733 375 aaKnown RBP4.06□□□□□ -1.76
RNA5SP88-201ENST00000365560 NUF2Q9BZD4 464 aa4.06□□□□□ -1.76
RNA5SP88-201ENST00000365560 GLIS2Q9BZE0 524 aaPredicted RBP4.06□□□□□ -1.76
RNA5SP88-201ENST00000365560 PCDHA7Q9UN72 937 aa4.06□□□□□ -1.76
RNA5SP88-201ENST00000365560 A3GALT2U3KPV4 340 aa4.06□□□□□ -1.76
RNA5SP88-201ENST00000365560 EPB41L2O43491 1005 aaKnown RBP4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 KLK8O60259 260 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 RGS11O94810 467 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 MT-CYBP00156 380 aaPredicted RBP4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 HOXC6P09630 235 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 IRF1P10914 325 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 UBL4AP11441 157 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 HOXA11P31270 313 aaPredicted RBP4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 DDIT3P35638 169 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 MLH1P40692 756 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 NUDT6P53370 316 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 CTTNQ14247 550 aaKnown RBP4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 ARHGEF6Q15052 776 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 RNPS1Q15287 305 aaKnown RBP4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 LRRC8EQ6NSJ5 796 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 SFTPA2Q8IWL1 248 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 DHX40Q8IX18 779 aaKnown RBP4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 PARP16Q8N5Y8 322 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 OTULINQ96BN8 352 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 SAAL1Q96ER3 474 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 SIN3AQ96ST3 1273 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 MXRA8Q9BRK3 442 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 CLK4Q9HAZ1 481 aaKnown RBP4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 SMYD2Q9NRG4 433 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 CYSLTR2Q9NS75 346 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 TMEM51Q9NW97 253 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 TAS2R10Q9NYW0 307 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 MYO6Q9UM54 1294 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 A4GNTQ9UNA3 340 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 FAM96BQ9Y3D0 163 aa4.05□□□□□ -1.76
RNA5SP88-201ENST00000365560 IGHV4-28A0A0C4DH34 117 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 A0A1B0GVM2 712 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 A0A1W2PPH5 198 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 B4E171 279 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 NPIPB11E5RHQ5 1161 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 IFNL4K9M1U5 179 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 MTA2O94776 668 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 CD4P01730 458 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 TFP02787 698 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 SNHG28P0DPA3 235 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 ITGAXP20702 1163 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 CPOXP36551 454 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 TSPAN7P41732 249 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 CDKN2AP42771 156 aaKnown RBP4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 GABRB2P47870 512 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 AMTP48728 403 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 HARS2P49590 506 aaKnown RBP4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 HTR6P50406 440 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 EIF3BP55884 814 aaKnown RBP4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 HDAC4P56524 1084 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 KRTAP10-11P60412 298 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 CRYZQ08257 329 aaKnown RBP4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 NEXNQ0ZGT2 675 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 GRIK3Q13003 919 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 FHL1Q13642 323 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 PPP2R5BQ15173 497 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 SHBQ15464 509 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 SLC4A8Q2Y0W8 1093 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 TDRD12Q587J7 1177 aaKnown RBP4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 SLC46A3Q7Z3Q1 461 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 NOXA1Q86UR1 476 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 SAMD14Q8IZD0 417 aaPredicted RBP4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 TEX19Q8NA77 164 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 NEXN-AS1Q8NBZ9 246 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 ADAMTS14Q8WXS8 1223 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 TRIB2Q92519 343 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 BBS4Q96RK4 519 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 NTPCRQ9BSD7 190 aaKnown RBP4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 WACQ9BTA9 647 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 H2AFJQ9BTM1 129 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 PLEKHA4Q9H4M7 779 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 BRF2Q9HAW0 419 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 PCDHB16Q9NRJ7 776 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 IRAK4Q9NWZ3 460 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 SLC45A1Q9Y2W3 748 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 NFE2L3Q9Y4A8 694 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 LSM4Q9Y4Z0 139 aaKnown RBP4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 SCINQ9Y6U3 715 aa4.04□□□□□ -1.76
RNA5SP88-201ENST00000365560 SEC31AO94979 1220 aaKnown RBP4.03□□□□□ -1.76
RNA5SP88-201ENST00000365560 RTN3O95197 1032 aaPredicted RBP4.03□□□□□ -1.76
RNA5SP88-201ENST00000365560 MBD4O95243 580 aa4.03□□□□□ -1.76
RNA5SP88-201ENST00000365560 ETFAP13804 333 aa4.03□□□□□ -1.76
RNA5SP88-201ENST00000365560 AGAP20933 346 aa4.03□□□□□ -1.76
RNA5SP88-201ENST00000365560 PCYT1AP49585 367 aa4.03□□□□□ -1.76
RNA5SP88-201ENST00000365560 CTCFP49711 727 aaPredicted RBP4.03□□□□□ -1.76
RNA5SP88-201ENST00000365560 GNAQP50148 359 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms