RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 MYLK3Q32MK0 819 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 BBS9Q3SYG4 887 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 DNAJC21Q5F1R6 531 aaKnown RBP20.82■□□□□ 0.92
SHISA4-201ENST00000362011 FSTL4Q6MZW2 842 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 FBXO38Q6PIJ6 1188 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 TPRG1Q6ZUI0 275 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 DNAAF3Q8N9W5 541 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 OR6K2Q8NGY2 324 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 NSMCE3Q96MG7 304 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 TUBGCP5Q96RT8 1024 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 TDRD1Q9BXT4 1180 aaKnown RBP20.82■□□□□ 0.92
SHISA4-201ENST00000362011 ATP13A3Q9H7F0 1226 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 SAYSD1Q9NPB0 183 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 SIT1Q9Y3P8 196 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 RAI2Q9Y5P3 530 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 EP300Q09472 2414 aaPredicted RBP20.81■□□□□ 0.92
SHISA4-201ENST00000362011 EDDM13A0A1B0GTR0 161 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 LOC285095A0A1B0GVY8 99 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 WASH3PC4AMC7 463 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 E7ESA3 106 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 STK25O00506 426 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 POP4O95707 220 aaKnown RBP20.81■□□□□ 0.92
SHISA4-201ENST00000362011 EGFP01133 1207 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 MAGEA3P43357 314 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 BCL2L1Q07817 233 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 DHX9Q08211 1270 aaKnown RBP20.81■□□□□ 0.92
SHISA4-201ENST00000362011 TRAF2Q12933 501 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 PDIA2Q13087 525 aaKnown RBP20.81■□□□□ 0.92
SHISA4-201ENST00000362011 CBLBQ13191 982 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 MLF2Q15773 248 aaPredicted RBP20.81■□□□□ 0.92
SHISA4-201ENST00000362011 RANBP10Q6VN20 620 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 DPY19L3Q6ZPD9 716 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 KDELC2Q7Z4H8 507 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 TMC3Q7Z5M5 1100 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 ZNF513Q8N8E2 541 aaPredicted RBP20.81■□□□□ 0.92
SHISA4-201ENST00000362011 OR2A12Q8NGT7 310 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 FAM3CQ92520 227 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 ANKRD7Q92527 254 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 EZH1Q92800 747 aaPredicted RBP20.81■□□□□ 0.92
SHISA4-201ENST00000362011 PTPRN2Q92932 1015 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 CPEB1Q9BZB8 566 aaKnown RBP20.81■□□□□ 0.92
SHISA4-201ENST00000362011 TMEM245Q9H330 911 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 ZDHHC6Q9H6R6 413 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 SUN2Q9UH99 717 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 PCDHGC4Q9Y5F7 938 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 R4GN57 208 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 FANCMQ8IYD8 2048 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 DMXL1Q9Y485 3027 aa20.81■□□□□ 0.92
SHISA4-201ENST00000362011 F5P12259 2224 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 MAN2B1O00754 1011 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 SOCS5O75159 536 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 NDST3O95803 873 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 EPOP01588 193 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 DCNP07585 359 aaKnown RBP20.8■□□□□ 0.92
SHISA4-201ENST00000362011 SP9P0CG40 484 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 HLA-DPA1P20036 260 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 SERPINA4P29622 427 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 IL12RB1P42701 662 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 NPY2RP49146 381 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 SEC13P55735 322 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 SLC1A5Q15758 541 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 HNRNPA1L2Q32P51 320 aaKnown RBP20.8■□□□□ 0.92
SHISA4-201ENST00000362011 MSS51Q4VC12 460 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 EMC10Q5UCC4 262 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 C1orf210Q8IVY1 113 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 SLC25A41Q8N5S1 370 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 ZNF366Q8N895 744 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 LRRC39Q96DD0 335 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 HEPHQ9BQS7 1158 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 ARNT2Q9HBZ2 717 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 ARFGAP3Q9NP61 516 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 HCN2Q9UL51 889 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 CHKBQ9Y259 395 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 DNAH14Q0VDD8 3507 aa20.8■□□□□ 0.92
SHISA4-201ENST00000362011 ZNF106Q9H2Y7 1883 aaKnown RBP20.79■□□□□ 0.92
SHISA4-201ENST00000362011 AVILO75366 819 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 BANF1O75531 89 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 PIGNO95427 931 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 FGF1P05230 155 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 HLA-EP13747 358 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 PRKCHP24723 683 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 GKP32189 559 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 TIE1P35590 1138 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 KIR2DL1P43626 348 aaPredicted RBP20.79■□□□□ 0.92
SHISA4-201ENST00000362011 CHRNA4P43681 627 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 SESN2P58004 480 aaPredicted RBP20.79■□□□□ 0.92
SHISA4-201ENST00000362011 MTM1Q13496 603 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 BEND6Q5SZJ8 279 aaPredicted RBP20.79■□□□□ 0.92
SHISA4-201ENST00000362011 ARMC12Q5T9G4 340 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 DENND5AQ6IQ26 1287 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 RELL1Q8IUW5 271 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 MAML2Q8IZL2 1156 aaPredicted RBP20.79■□□□□ 0.92
SHISA4-201ENST00000362011 CHST14Q8NCH0 376 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 PJA1Q8NG27 643 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 KCNV2Q8TDN2 545 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 PDCD6IPQ8WUM4 868 aaKnown RBP20.79■□□□□ 0.92
SHISA4-201ENST00000362011 RMDN1Q96DB5 314 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 TRIB3Q96RU7 358 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 TXLNGYQ9BZA5 131 aa20.79■□□□□ 0.92
SHISA4-201ENST00000362011 MTG2Q9H4K7 406 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms