RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 DOCK7Q96N67 2140 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 C1orf232A0A0U1RR37 186 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 TIPRLO75663 272 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 MAP3K6O95382 1288 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 OASLQ15646 514 aaKnown RBP9.74□□□□□ -0.85
CUX1-203ENST00000360264 MARK2Q7KZI7 788 aaKnown RBP9.74□□□□□ -0.85
CUX1-203ENST00000360264 ZC3H7AQ8IWR0 971 aaKnown RBP9.74□□□□□ -0.85
CUX1-203ENST00000360264 COL26A1Q96A83 441 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 SENP6Q9GZR1 1112 aaPredicted RBP9.74□□□□□ -0.85
CUX1-203ENST00000360264 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.74□□□□□ -0.85
CUX1-203ENST00000360264 MARK1Q9P0L2 795 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 DDX20Q9UHI6 824 aaKnown RBP9.74□□□□□ -0.85
CUX1-203ENST00000360264 CASP4P49662 377 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 CEP68Q76N32 757 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 PLPPR4Q7Z2D5 763 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 SNRNP27Q8WVK2 155 aaKnown RBP9.74□□□□□ -0.85
CUX1-203ENST00000360264 SEMA6BQ9H3T3 888 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 EXD2Q9NVH0 621 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 MGAT4AQ9UM21 535 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 PSMD13Q9UNM6 376 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 CACNA1IQ9P0X4 2223 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 PTGES3LE9PB15 166 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 TPP1O14773 563 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 MKRN4PQ13434 485 aaPredicted RBP9.74□□□□□ -0.85
CUX1-203ENST00000360264 BTN2A1Q7KYR7 527 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 RASAL3Q86YV0 1011 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 OFCC1Q8IZS5 231 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 EMC1Q8N766 993 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 BHLHE22Q8NFJ8 381 aaPredicted RBP9.74□□□□□ -0.85
CUX1-203ENST00000360264 HDAC7Q8WUI4 952 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 RASSF5Q8WWW0 418 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 ITCHQ96J02 903 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 RASSF1Q9NS23 344 aa9.74□□□□□ -0.85
CUX1-203ENST00000360264 MIPP30301 263 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 ELK3P41970 407 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 DPYSQ14117 519 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 POTEHQ6S545 545 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 KIAA1324Q6UXG2 1013 aaKnown RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 PGRMC2O15173 223 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 SRP54P61011 504 aaKnown RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 MPPE1Q53F39 396 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 STXBP5Q5T5C0 1151 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 BEND5Q7L4P6 421 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 C1QTNF1Q9BXJ1 281 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 RSL24D1Q9UHA3 163 aaKnown RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 TLX3O43711 291 aaPredicted RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 ACAT1P24752 427 aaKnown RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 FKBP1BP68106 108 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 DPYSL3Q14195 570 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 DNAJB7Q7Z6W7 309 aaPredicted RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 OMA1Q96E52 524 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 BBIP1A8MTZ0 92 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 ATP4AP20648 1035 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 AMPD1P23109 780 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 MRPS6P82932 125 aaKnown RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 PIWIL4Q7Z3Z4 852 aaKnown RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 CPA4Q9UI42 421 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 SLIT1O75093 1534 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 ABCA9Q8IUA7 1624 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 CCDC182A6NF36 153 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 RECQL4O94761 1208 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 ACVR2BQ13705 512 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 CELF3Q5SZQ8 465 aaKnown RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 THOC7Q6I9Y2 204 aaKnown RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 DNAJC14Q6Y2X3 702 aaPredicted RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 GAS2L1Q99501 681 aaPredicted RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 KLQ9UEF7 1012 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 MTF2Q9Y483 593 aaPredicted RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 A0A1W2PRG6 482 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 DNTTP04053 509 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 FAM153CQ494X1 144 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 NAALADL1Q9UQQ1 740 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 A0A0B4J269 797 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 CCDC166P0CW27 439 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 PTPN1P18031 435 aaKnown RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 ANTXR2P58335 489 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 ANXA8L1Q5VT79 327 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 HEATR4Q86WZ0 1026 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 ZNF670Q9BS34 389 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 RNPEPQ9H4A4 650 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 SSR3Q9UNL2 185 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 MYO5BQ9ULV0 1848 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 DIP2AQ14689 1571 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 HGFP14210 728 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 SLC6A2P23975 617 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 GALNT3Q14435 633 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 QPRTQ15274 297 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 SMU1Q2TAY7 513 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 MON1AQ86VX9 555 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 CCDC36Q8IYA8 594 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 PIK3C3Q8NEB9 887 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 TRMOQ9BU70 441 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 WRBO00258 174 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 OR10H3O60404 316 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 SLC25A14O95258 325 aaPredicted RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 AP3S2P59780 193 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 ORC1Q13415 861 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 RDH11Q8TC12 318 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 APOL2Q9BQE5 337 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 AASDHPPTQ9NRN7 309 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms