RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 REXO4Q9GZR2 422 aaKnown RBP13.81□□□□□ -0.2
VCP-201ENST00000358901 TMEM216Q9P0N5 145 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 ZNF180Q9UJW8 692 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 WASF2Q9Y6W5 498 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 LOC100506127A0A0U1RQW1 187 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 PGK1P00558 417 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 ANXA5P08758 320 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 VCLP18206 1134 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 BRCC3P46736 316 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 PIK3CGP48736 1102 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 PPIL2Q13356 520 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 PEX6Q13608 980 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 DLG2Q15700 870 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 SPANXN2Q5MJ10 180 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 GPR107Q5VW38 600 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 GPRIN3Q6ZVF9 776 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 KCTD15Q96SI1 283 aaPredicted RBP13.81□□□□□ -0.2
VCP-201ENST00000358901 GATA5Q9BWX5 397 aaPredicted RBP13.81□□□□□ -0.2
VCP-201ENST00000358901 NIFKQ9BYG3 293 aaKnown RBP13.81□□□□□ -0.2
VCP-201ENST00000358901 ARHGEF4Q9NR80 690 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 C3orf18Q9UK00 162 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 ST3GAL5Q9UNP4 418 aa13.81□□□□□ -0.2
VCP-201ENST00000358901 PPP2R1BP30154 601 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 EPS8Q12929 822 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 MTA1Q13330 715 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 ZNF618Q5T7W0 954 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 METTL21CQ5VZV1 264 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 SAPCD2Q86UD0 394 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 TRPM4Q8TD43 1214 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 MRPS26Q9BYN8 205 aaKnown RBP13.8□□□□□ -0.2
VCP-201ENST00000358901 NOL11Q9H8H0 719 aaKnown RBP13.8□□□□□ -0.2
VCP-201ENST00000358901 KLHL3Q9UH77 587 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 C2CD4BA6NLJ0 364 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 ABLIM1O14639 778 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 EPN2O95208 641 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 IGSF6O95976 241 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 COX7A2P14406 83 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 TTPAP49638 278 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 GRM3Q14832 879 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 FAM182AQ5T1J6 154 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 RSBN1Q5VWQ0 802 aaPredicted RBP13.8□□□□□ -0.2
VCP-201ENST00000358901 LBX2Q6XYB7 198 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 ARRDC4Q8NCT1 418 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 PCDH19Q8TAB3 1148 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 EMID1Q96A84 441 aaPredicted RBP13.8□□□□□ -0.2
VCP-201ENST00000358901 TRMOQ9BU70 441 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 NOL6Q9H6R4 1146 aaKnown RBP13.8□□□□□ -0.2
VCP-201ENST00000358901 SSU72Q9NP77 194 aaKnown RBP13.8□□□□□ -0.2
VCP-201ENST00000358901 STK39Q9UEW8 545 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 MDM4O15151 490 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 CD3EAPO15446 510 aaKnown RBP13.8□□□□□ -0.2
VCP-201ENST00000358901 SNAP91O60641 907 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 GRK3P35626 688 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 XIAPP98170 497 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.8□□□□□ -0.2
VCP-201ENST00000358901 INAQ16352 499 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 CPSF6Q16630 551 aaKnown RBP eCLIP13.8□□□□□ -0.2
VCP-201ENST00000358901 BROXQ5VW32 411 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 OR7A2PQ8NGA2 310 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 SLC7A5P2Q9GIP4 190 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 RSL24D1Q9UHA3 163 aaKnown RBP13.8□□□□□ -0.2
VCP-201ENST00000358901 ITM2BQ9Y287 266 aa13.8□□□□□ -0.2
VCP-201ENST00000358901 C3P01024 1663 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 PAGE1O75459 146 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 LGR5O75473 907 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 MFN2O95140 757 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 SP100P23497 879 aaPredicted RBP13.79□□□□□ -0.2
VCP-201ENST00000358901 BNIP2Q12982 314 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 TRAF3Q13114 568 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 GALNT3Q14435 633 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 LIN52Q52LA3 116 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 CEP78Q5JTW2 689 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 SH3PXD2AQ5TCZ1 1133 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 RFWD3Q6PCD5 774 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 PHACTR4Q8IZ21 702 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 LRRC15Q8TF66 581 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 ZFP42Q96MM3 310 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 ZNF317Q96PQ6 595 aaPredicted RBP13.79□□□□□ -0.2
VCP-201ENST00000358901 CLK4Q9HAZ1 481 aaKnown RBP13.79□□□□□ -0.2
VCP-201ENST00000358901 RCOR3Q9P2K3 495 aaPredicted RBP13.79□□□□□ -0.2
VCP-201ENST00000358901 DLG5Q8TDM6 1919 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 NFAT5O94916 1531 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 TK2O00142 265 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 MSI1O43347 362 aaKnown RBP13.79□□□□□ -0.2
VCP-201ENST00000358901 PCBP1Q15365 356 aaKnown RBP eCLIP13.79□□□□□ -0.26e-7■■■■□ 25.9
VCP-201ENST00000358901 RALGPS1Q5JS13 557 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 TXNRD3NBQ6F5E7 133 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 TOP6BLQ8N6T0 577 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 ADCY4Q8NFM4 1077 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 QKIQ96PU8 341 aaKnown RBP eCLIP13.79□□□□□ -0.2
VCP-201ENST00000358901 YME1L1Q96TA2 773 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 C2orf49Q9BVC5 232 aaPredicted RBP13.79□□□□□ -0.2
VCP-201ENST00000358901 MTIF3Q9H2K0 278 aaKnown RBP13.79□□□□□ -0.2
VCP-201ENST00000358901 ETAA1Q9NY74 926 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 SLC12A4Q9UP95 1085 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 GNEQ9Y223 722 aaKnown RBP13.79□□□□□ -0.2
VCP-201ENST00000358901 MAFBQ9Y5Q3 323 aaPredicted RBP13.79□□□□□ -0.2
VCP-201ENST00000358901 KNDC1Q76NI1 1749 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 LIN7AO14910 233 aaPredicted RBP13.79□□□□□ -0.2
VCP-201ENST00000358901 LIMK2P53671 638 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms