RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 WDR36Q8NI36 951 aaKnown RBP11.06□□□□□ -0.64
FN1-205ENST00000357867 COPS8Q99627 209 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 SMAD5Q99717 465 aaKnown RBP11.06□□□□□ -0.64
FN1-205ENST00000357867 PIF1Q9H611 641 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 TDRD6O60522 2096 aaKnown RBP11.06□□□□□ -0.64
FN1-205ENST00000357867 C15orf38-AP3S2A0A0A6YYH1 394 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 DNM1LO00429 736 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 ACRP10323 421 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 SMPD1P17405 629 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 DGKEP52429 567 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 TTC33Q6PID6 262 aaPredicted RBP11.06□□□□□ -0.64
FN1-205ENST00000357867 FAM151BQ6UXP7 276 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 ARPINQ7Z6K5 226 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 C17orf64Q86WR6 236 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 DNAAF5Q86Y56 855 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 FAM71AQ8IYT1 594 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 DPEP2Q9H4A9 486 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 MRPL42Q9Y6G3 142 aaKnown RBP11.06□□□□□ -0.64
FN1-205ENST00000357867 ADGRA3Q8IWK6 1321 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 CTPS1P17812 591 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 FAM228AQ86W67 206 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 EPHX4Q8IUS5 362 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 RNASE11Q8TAA1 199 aaKnown RBP11.06□□□□□ -0.64
FN1-205ENST00000357867 NIFKQ9BYG3 293 aaKnown RBP11.06□□□□□ -0.64
FN1-205ENST00000357867 HEY2Q9UBP5 337 aa11.06□□□□□ -0.64
FN1-205ENST00000357867 SLC28A1O00337 649 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 KLQ9UEF7 1012 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 N4BP2Q86UW6 1770 aaPredicted RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 A0A087X0B3 334 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 YDJCA8MPS7 323 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 ITGAVP06756 1048 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 CCDC166P0CW27 439 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 WDR59Q6PJI9 974 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 TTC29Q8NA56 475 aaPredicted RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 OR4L1Q8NH43 312 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 FCRL2Q96LA5 508 aaPredicted RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 ZIM3Q96PE6 472 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 VPS4AQ9UN37 437 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 MFHAS1Q9Y4C4 1052 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 POP4O95707 220 aaKnown RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 ASLP04424 464 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 MICU2Q8IYU8 434 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 WFIKKN2Q8TEU8 576 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 HAS1Q92839 578 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 CLP1Q92989 425 aaKnown RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 C19orf60Q96EN9 201 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 RACGAP1Q9H0H5 632 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 NEMP2A6NFY4 417 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 MCIDASD6RGH6 385 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 DNALI1O14645 258 aaPredicted RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 IDSP22304 550 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 CMPK1P30085 196 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 CASRP41180 1078 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 GYS2P54840 703 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 CAP1Q01518 475 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 HYIQ5T013 277 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 CERCAMQ5T4B2 595 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 MCRS1Q96EZ8 462 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 INPP4AQ96PE3 977 aaPredicted RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 A0A1B0GVM2 712 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 TCAF2A6NFQ2 919 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 MASP1P48740 699 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 ILF3Q12906 894 aaKnown RBP eCLIP11.05□□□□□ -0.646e-9■■■■■ 27.7
FN1-205ENST00000357867 DPYSL3Q14195 570 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 TRIP10Q15642 601 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 N4BP2L1Q5TBK1 243 aaPredicted RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 VITQ6UXI7 678 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 CASKIN2Q8WXE0 1202 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 MRPL45Q9BRJ2 306 aaKnown RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 LHX5Q9H2C1 402 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 NEUROD4Q9HD90 331 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 SEMA3GQ9NS98 782 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 VAV3Q9UKW4 847 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 SERPINE1P05121 402 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 CALB2P22676 271 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 VARSP26640 1264 aaKnown RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 RBL1P28749 1068 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 S100GP29377 79 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 BRCC3P46736 316 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 SLC5A3P53794 718 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 ALKBH2Q6NS38 261 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 SH2D3CQ8N5H7 860 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 TERB1Q8NA31 727 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 WRAP53Q9BUR4 548 aaKnown RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 TRMT61BQ9BVS5 477 aaKnown RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 PCDHB1Q9Y5F3 818 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 TM7SF2O76062 418 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 LTA4HP09960 611 aaKnown RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 GOT1P17174 413 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 RPL21P46778 160 aaKnown RBP11.05□□□□□ -0.64
FN1-205ENST00000357867 GALNT3Q14435 633 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 FAM220AQ7Z4H9 259 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 ZSWIM2Q8NEG5 633 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 FIG4Q92562 907 aa11.05□□□□□ -0.64
FN1-205ENST00000357867 ROBO3Q96MS0 1386 aa11.04□□□□□ -0.64
FN1-205ENST00000357867 CXCR3P49682 368 aa11.04□□□□□ -0.64
FN1-205ENST00000357867 MTAPQ13126 283 aa11.04□□□□□ -0.64
FN1-205ENST00000357867 DYNC1I2Q13409 638 aaKnown RBP11.04□□□□□ -0.64
FN1-205ENST00000357867 MIIPQ5JXC2 388 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms