RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 ISL2Q96A47 359 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 DCUN1D1Q96GG9 259 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 MPP4Q96JB8 637 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 ZFRQ96KR1 1074 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 SPATA17Q96L03 361 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 MRPS26Q9BYN8 205 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 DHX35Q9H5Z1 703 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 CCSER2Q9H7U1 834 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 ANLNQ9NQW6 1124 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 ABCC13Q9NSE7 274 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 CLIC5Q9NZA1 410 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 LMCD1Q9NZU5 365 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 STK39Q9UEW8 545 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 RWDD3Q9Y3V2 267 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 INSL5Q9Y5Q6 135 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 MAGEA12P43365 314 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 RANBP1P43487 201 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 INHBCP55103 352 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 EFEMP1Q12805 493 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 KLF10Q13118 480 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 FSCBQ5H9T9 825 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 ZNF697Q5TEC3 545 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 EPGNQ6UW88 154 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 MON1AQ86VX9 555 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 C10orf107Q8IVU9 208 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 SLC22A17Q8WUG5 538 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 STON2Q8WXE9 905 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 EMILIN2Q9BXX0 1053 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 SLC28A3Q9HAS3 691 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 UBAP1Q9NZ09 502 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 COPG2Q9UBF2 871 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 PADI4Q9UM07 663 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 MTCL1Q9Y4B5 1905 aaKnown RBP12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 PRUNE2Q8WUY3 3088 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 EPOPA6NHQ4 379 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 C5orf67F2Z3F1 127 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 TPP1O14773 563 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 RFPL2O75678 378 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 C8AP07357 584 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 HMBSP08397 361 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 KCNA4P22459 653 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 GLDCP23378 1020 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 SERPINB6P35237 376 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 APOFQ13790 326 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 MYBPC3Q14896 1274 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 SH2D4BQ5SQS7 431 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 PHTF2Q8N3S3 785 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 METTL25Q8N6Q8 603 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 KREMEN2Q8NCW0 462 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 CATSPER1Q8NEC5 780 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 ATP2A3Q93084 1043 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 NT5C3BQ969T7 300 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 Q9H521 79 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 MTMR10Q9NXD2 777 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 MSRAQ9UJ68 235 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 AP4E1Q9UPM8 1137 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 SNX10Q9Y5X0 201 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 ATG2AQ2TAZ0 1938 aa12.81□□□□□ -0.36
RTFDC1-202ENST00000357348 CAPN8A6NHC0 703 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 I6L893 689 aaPredicted RBP12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 ZBTB14O43829 449 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 CLPTM1O96005 669 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 MOCS2O96007 188 aaPredicted RBP12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 GLUD1P00367 558 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 HMGA1P17096 107 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 ERVK-21P61565 698 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 RBM44Q6ZP01 1051 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 STRADAQ7RTN6 431 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 DNAJB7Q7Z6W7 309 aaPredicted RBP12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 ADGRD2Q7Z7M1 963 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 TCEAL8Q8IYN2 117 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 LRRN4Q8WUT4 740 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 CCDC124Q96CT7 223 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 NMD3Q96D46 503 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 CNDP1Q96KN2 507 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 QKIQ96PU8 341 aaKnown RBP eCLIP12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 PREBQ9HCU5 417 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 TLR8Q9NR97 1041 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 RIMS3Q9UJD0 308 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 LZTS1Q9Y250 596 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 SPTBN5Q9NRC6 3674 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 ANAPC1Q9H1A4 1944 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 CCL16O15467 120 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 PGM3O95394 542 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 LRG1P02750 347 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 RALBP11234 206 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 EPCAMP16422 314 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 GRIA1P42261 906 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 EPHB3P54753 998 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 ADGRE1Q14246 886 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 VEPH1Q14D04 833 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 GRAMD1BQ3KR37 738 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 NADK2Q4G0N4 442 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 TCHHL1Q5QJ38 904 aaPredicted RBP12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 C10orf120Q5SQS8 335 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 ZFP1Q6P2D0 407 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 LILRA6Q6PI73 481 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 KLHDC10Q6PID8 442 aa12.8□□□□□ -0.36
RTFDC1-202ENST00000357348 CHRDL2Q6WN34 429 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms