RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 LIMA1Q9UHB6 759 aaKnown RBP16.04■□□□□ 0.16
PDGFA-201ENST00000354513 DAAM1Q9Y4D1 1078 aa16.04■□□□□ 0.16
PDGFA-201ENST00000354513 TEX51A0A1B0GUA7 166 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 LGALS16A8MUM7 142 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 LMO7DNF2Z398 122 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 CALB1P05937 261 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 TSHRP16473 764 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 EIF4A3P38919 411 aaKnown RBP16.03■□□□□ 0.16
PDGFA-201ENST00000354513 RGRP47804 291 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 THOP1P52888 689 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 YBEYP58557 167 aaPredicted RBP16.03■□□□□ 0.16
PDGFA-201ENST00000354513 ERVPABLB-1P60509 514 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 YPEL5P62699 121 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 WSCD2Q2TBF2 565 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 EFHC2Q5JST6 749 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 ZNF843Q8N446 348 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 BTN2A2Q8WVV5 523 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 CASKIN2Q8WXE0 1202 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 FUBP1Q96AE4 644 aaKnown RBP16.03■□□□□ 0.16
PDGFA-201ENST00000354513 ARHGEF26Q96DR7 871 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 NSMCE3Q96MG7 304 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 CPEB1Q9BZB8 566 aaKnown RBP16.03■□□□□ 0.16
PDGFA-201ENST00000354513 GPATCH2LQ9NWQ4 482 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 RABGEF1Q9UJ41 708 aa16.03■□□□□ 0.16
PDGFA-201ENST00000354513 EIF4E1BA6NMX2 242 aaKnown RBP16.02■□□□□ 0.16
PDGFA-201ENST00000354513 J3KR12 359 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 MUSKO15146 869 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 YY2O15391 372 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 CREB3O43889 395 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 BUB1BO60566 1050 aaPredicted RBP16.02■□□□□ 0.16
PDGFA-201ENST00000354513 ZIC2O95409 532 aaPredicted RBP16.02■□□□□ 0.16
PDGFA-201ENST00000354513 PTK2BQ14289 1009 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 NCAPHQ15003 741 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 CA9Q16790 459 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 ALG11Q2TAA5 492 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 PARP15Q460N3 678 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 FKBP15Q5T1M5 1219 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 DNAJC24Q6P3W2 148 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 SCYL2Q6P3W7 929 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 CYP4V2Q6ZWL3 525 aaPredicted RBP16.02■□□□□ 0.16
PDGFA-201ENST00000354513 LSMEM2Q8N112 164 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 ARFGAP1Q8N6T3 406 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 KYQ8NBH2 561 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 LSM14AQ8ND56 463 aaKnown RBP16.02■□□□□ 0.16
PDGFA-201ENST00000354513 CXorf40AQ8TE69 158 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 ERGIC2Q96RQ1 377 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 PEBP4Q96S96 227 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 IL12RB2Q99665 862 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 AGPAT1Q99943 283 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 ABCG4Q9H172 646 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 EVA1BQ9NVM1 165 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 TAS2R14Q9NYV8 317 aa16.02■□□□□ 0.16
PDGFA-201ENST00000354513 ARHGEF17Q96PE2 2063 aaPredicted RBP16.02■□□□□ 0.15
PDGFA-201ENST00000354513 ZFC3H1O60293 1989 aaKnown RBP16.01■□□□□ 0.15
PDGFA-201ENST00000354513 CDRT15L2A8MXV6 281 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 NTN3O00634 580 aaPredicted RBP16.01■□□□□ 0.15
PDGFA-201ENST00000354513 PRKCGP05129 697 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 C6P13671 934 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 GM2AP17900 193 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 MMP12P39900 470 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 RALGDSQ12967 914 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 TCEA2Q15560 299 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 RBM44Q6ZP01 1051 aaKnown RBP16.01■□□□□ 0.15
PDGFA-201ENST00000354513 ZNF354CQ86Y25 554 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 MCOLN2Q8IZK6 566 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 NEK11Q8NG66 645 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 KCNE4Q8WWG9 221 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 TSACCQ96A04 125 aaPredicted RBP16.01■□□□□ 0.15
PDGFA-201ENST00000354513 SLC46A1Q96NT5 459 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 CCDC3Q9BQI4 270 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 CNPY3Q9BT09 278 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.01■□□□□ 0.15
PDGFA-201ENST00000354513 PCDH12Q9NPG4 1184 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 NCKIPSDQ9NZQ3 722 aa16.01■□□□□ 0.15
PDGFA-201ENST00000354513 RIOK3O14730 519 aaKnown RBP16■□□□□ 0.15
PDGFA-201ENST00000354513 PRAMEF11O60813 436 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 TCEA3O75764 348 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 AIF1P55008 147 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 TMPRSS3P57727 454 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 C19orf57Q0VDD7 668 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 AGERQ15109 404 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 FAXCQ5TGI0 409 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 AFMIDQ63HM1 303 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 DNAAF5Q86Y56 855 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 ARHGAP12Q8IWW6 846 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 PLA2G15Q8NCC3 412 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 PCDH19Q8TAB3 1148 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 CELF6Q96J87 481 aaKnown RBP16■□□□□ 0.15
PDGFA-201ENST00000354513 SLC39A8Q9C0K1 460 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 SUV39H2Q9H5I1 410 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 UBA2Q9UBT2 640 aaPredicted RBP16■□□□□ 0.15
PDGFA-201ENST00000354513 PCDHGA8Q9Y5G5 932 aa16■□□□□ 0.15
PDGFA-201ENST00000354513 BSNQ9UPA5 3926 aa15.99■□□□□ 0.15
PDGFA-201ENST00000354513 TOR1BO14657 336 aa15.99■□□□□ 0.15
PDGFA-201ENST00000354513 FGF10O15520 208 aaPredicted RBP15.99■□□□□ 0.15
PDGFA-201ENST00000354513 KLK10O43240 276 aa15.99■□□□□ 0.15
PDGFA-201ENST00000354513 ATMINO43313 823 aaPredicted RBP15.99■□□□□ 0.15
PDGFA-201ENST00000354513 ANXA6P08133 673 aa15.99■□□□□ 0.15
PDGFA-201ENST00000354513 HK3P52790 923 aa15.99■□□□□ 0.15
PDGFA-201ENST00000354513 PPARDQ03181 441 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms