RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 TM6SF2Q9BZW4 377 aa16.05■□□□□ 0.16
DDX55-202ENST00000354291 B3GNT4Q9C0J1 378 aa16.05■□□□□ 0.16
DDX55-202ENST00000354291 UBE2TQ9NPD8 197 aaPredicted RBP16.05■□□□□ 0.16
DDX55-202ENST00000354291 ACTL7AQ9Y615 435 aa16.05■□□□□ 0.16
DDX55-202ENST00000354291 A1L4Q6 167 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 PRR19A6NJB7 356 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 MED7O43513 233 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 TM7SF2O76062 418 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 KRT5P13647 590 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 OR1E1P30953 314 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 UGT1A3P35503 534 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 SERPINH1P50454 418 aaKnown RBP16.04■□□□□ 0.16
DDX55-202ENST00000354291 SRP54P61011 504 aaKnown RBP16.04■□□□□ 0.16
DDX55-202ENST00000354291 SLC20A2Q08357 652 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 KLRB1Q12918 225 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 KLHL40Q2TBA0 621 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 C5orf22Q49AR2 442 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 LACTB2Q53H82 288 aaPredicted RBP16.04■□□□□ 0.16
DDX55-202ENST00000354291 ZNF805Q5CZA5 627 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 CERCAMQ5T4B2 595 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 TTC7BQ86TV6 843 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 CREBRFQ8IUR6 639 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 SFTPA2Q8IWL1 248 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 CXorf40AQ8TE69 158 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 STK32AQ8WU08 396 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 PMEPA1Q969W9 287 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 KREMEN1Q96MU8 473 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 EPAS1Q99814 870 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 CEP44Q9C0F1 390 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 CDH19Q9H159 772 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 MPP6Q9NZW5 540 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 CHMP5Q9NZZ3 219 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 SDK2Q58EX2 2172 aa16.04■□□□□ 0.16
DDX55-202ENST00000354291 TMEM110-MUSTN1A8MSY1 372 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 TOR1BO14657 336 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 TNFP01375 233 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 FGF3P11487 239 aaPredicted RBP16.03■□□□□ 0.16
DDX55-202ENST00000354291 ITIH2P19823 946 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 HTR1BP28222 390 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 UQCRFS1P47985 274 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 ARSDP51689 593 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 MTA1Q13330 715 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 MEA1Q16626 185 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 DEFB109BQ30KR1 87 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 EFHC2Q5JST6 749 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 TAF8Q7Z7C8 310 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 TEX19Q8NA77 164 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 MLKLQ8NB16 471 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 TP53I13Q8NBR0 393 aaPredicted RBP16.03■□□□□ 0.16
DDX55-202ENST00000354291 ARHGEF26Q96DR7 871 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 KLHL32Q96NJ5 620 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 SLC2A13Q96QE2 648 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 WRAP53Q9BUR4 548 aaKnown RBP16.03■□□□□ 0.16
DDX55-202ENST00000354291 ATP13A1Q9HD20 1204 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 KLQ9UEF7 1012 aa16.03■□□□□ 0.16
DDX55-202ENST00000354291 SPENQ96T58 3664 aaKnown RBP16.03■□□□□ 0.16
DDX55-202ENST00000354291 KRIT1O00522 736 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 DUX1O43812 170 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 VPS4BO75351 444 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 LETM1O95202 739 aaPredicted RBP16.02■□□□□ 0.16
DDX55-202ENST00000354291 UGT2B4P06133 528 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 PNLIPP16233 465 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 PEX5P50542 639 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 IRF4Q15306 451 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 TRIM65Q6PJ69 517 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 OGFOD3Q6PK18 319 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 LRRC31Q6UY01 552 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 SSC4DQ8WTU2 575 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 APOBEC4Q8WW27 367 aaKnown RBP16.02■□□□□ 0.16
DDX55-202ENST00000354291 TKTL2Q9H0I9 626 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 WDCPQ9H6R7 721 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 VPS4AQ9UN37 437 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 B3GALT1Q9Y5Z6 326 aa16.02■□□□□ 0.16
DDX55-202ENST00000354291 B4DGG1 531 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 AREL1O15033 823 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 CAPN5O15484 640 aaPredicted RBP16.01■□□□□ 0.15
DDX55-202ENST00000354291 B4GAT1O43505 415 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 RAD1O60671 282 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 SRGAP2O75044 1071 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 ZMPSTE24O75844 475 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 CPNE6O95741 557 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 NR1D1P20393 614 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 GNLYP22749 145 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 ALDH4A1P30038 563 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 OR1D5P58170 312 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 B4GALNT1Q00973 533 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 SEPT6Q14141 434 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 NFATC4Q14934 902 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 LRRC14Q15048 493 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 ARHGAP44Q17R89 818 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 C14orf28Q4W4Y0 310 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 EFHC1Q5JVL4 640 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 ZNF787Q6DD87 383 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 SMYD5Q6GMV2 418 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 GBP6Q6ZN66 633 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 ZNF606Q8WXB4 792 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 ART4Q93070 314 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 SLC45A3Q96JT2 553 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 CRACR2AQ9BSW2 395 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 APOOQ9BUR5 198 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms