RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 KIAA1456Q9P272 454 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 FETUBQ9UGM5 382 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 REXO2Q9Y3B8 237 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SPATA31A3Q5VYP0 1347 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ADCY9O60503 1353 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 FAM237AA0A1B0GTK4 181 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 FAM170AA1A519 330 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 LINC00473A8K010 186 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 E7ENX8 843 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PAX4O43316 350 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PROM1O43490 865 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CDKL5O76039 1030 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 EBLN1P0CF75 366 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ACO1P21399 889 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CNR2P34972 360 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SKIV2L2P42285 1042 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PIK3CAP42336 1068 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 MTHFRP42898 656 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 STAT2P52630 851 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ARSFP54793 590 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 HNRNPKP61978 463 aaKnown RBP eCLIP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PPP2R2BQ00005 443 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 RHAGQ02094 409 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CYP4A11Q02928 519 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TAP2Q03519 686 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 YWHAHQ04917 246 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TXNRD1Q16881 649 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SYTL3Q4VX76 610 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 DHRS13Q6UX07 377 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 RRM2BQ7LG56 351 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PRRT2Q7Z6L0 340 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 DTX2Q86UW9 622 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 RHPN2Q8IUC4 686 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PNPLA1Q8N8W4 532 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 FBXO15Q8NCQ5 510 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 OR14L1PQ8NHC6 308 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PRPF31Q8WWY3 499 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ROBO4Q8WZ75 1007 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 OVCA2Q8WZ82 227 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 AK8Q96MA6 479 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 NCAPGQ9BPX3 1015 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 HGH1Q9BTY7 390 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 THUMPD3Q9BV44 507 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CCDC106Q9BWC9 280 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PDZD7Q9H5P4 517 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TRPV4Q9HBA0 871 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 DUSP22Q9NRW4 184 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 GABRQQ9UN88 632 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ICKQ9UPZ9 632 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 HEMK1Q9Y5R4 338 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ASTN2O75129 1339 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 DCAF1Q9Y4B6 1507 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CYP2D7A0A087X1C5 515 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SCO2A0A1W2PP80 73 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 GTPBP10A4D1E9 387 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 GLOD5A6NK44 160 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 NPIPB6E9PJ23 425 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 H0YIZ8 118 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PSMD9O00233 223 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 MGST3O14880 152 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 YY2O15391 372 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 HBP1O60381 514 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CELF2O95319 508 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 NHLRC4P0CG21 123 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ITGAMP11215 1152 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ST6GAL1P15907 406 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ATP5F1P24539 256 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PSMA4P25789 261 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 HIBADHP31937 336 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF84P51523 738 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 POLR2FP61218 127 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ACTN3Q08043 901 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CRHR2Q13324 411 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 HFEQ30201 348 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SFRP4Q6FHJ7 346 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 GALNT17Q6IS24 598 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ZCCHC12Q6PEW1 402 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 UNC5DQ6UXZ4 953 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 BCDIN3DQ7Z5W3 292 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 NBPF11Q86T75 865 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 RFX6Q8HWS3 928 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 FAM219AQ8IW50 185 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 GSPT2Q8IYD1 628 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CCAR2Q8N163 923 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CMASQ8NFW8 434 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 KIF18AQ8NI77 898 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 GDAP1Q8TB36 358 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 NEU4Q8WWR8 484 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CABS1Q96KC9 395 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 DACH2Q96NX9 599 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 OLFM1Q99784 485 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 GATA5Q9BWX5 397 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 MRPL9Q9BYD2 267 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 KRTAP4-5Q9BYR2 181 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 REXO4Q9GZR2 422 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 HRH4Q9H3N8 390 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PLEKHA4Q9H4M7 779 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 WDR6Q9NNW5 1121 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TXNRD2Q9NNW7 524 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 NCKIPSDQ9NZQ3 722 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms