RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SULT2A1Q06520 285 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 THOC5Q13769 683 aaKnown RBP21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 TCEAL5Q5H9L2 206 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 FAM78AQ5JUQ0 283 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 ASTLQ6HA08 431 aaPredicted RBP21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 ANKRD54Q6NXT1 300 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 BLOC1S5Q8TDH9 187 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 FGF13Q92913 245 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 SMARCD2Q92925 531 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 RMDN1Q96DB5 314 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 LRRC3BQ96PB8 259 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 SLC25A13Q9UJS0 675 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 RIMKLBQ9ULI2 386 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 PCDHGC4Q9Y5F7 938 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 SMAD6O43541 496 aaKnown RBP21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 LDB2O43679 373 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 IGSF6O95976 241 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 PRLP01236 227 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 ARNTP27540 789 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 LIMK2P53671 638 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 IL9RQ01113 521 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 TRAF2Q12933 501 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 DHCR24Q15392 516 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 SEPT7Q16181 437 aaKnown RBP21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 UGP2Q16851 508 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 ATXN7L2Q5T6C5 722 aaPredicted RBP21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 GET4Q7L5D6 327 aaPredicted RBP21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 TAX1BP1Q86VP1 789 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 BPIFB1Q8TDL5 484 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 ACMSDQ8TDX5 336 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 RSPRY1Q96DX4 576 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 APOL5Q9BWW9 433 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 MLXIPLQ9NP71 852 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 MKS1Q9NXB0 559 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 HS3ST2Q9Y278 367 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 GOLGA8TH3BQL2 631 aa21.61■■□□□ 1.05
TSPAN3-202ENST00000346495 COPEO14579 308 aa21.61■■□□□ 1.05
TSPAN3-202ENST00000346495 TIMM44O43615 452 aa21.61■■□□□ 1.05
TSPAN3-202ENST00000346495 VIPR2P41587 438 aa21.61■■□□□ 1.05
TSPAN3-202ENST00000346495 PDE1BQ01064 536 aa21.61■■□□□ 1.05
TSPAN3-202ENST00000346495 KIAA0907Q7Z7F0 614 aaPredicted RBP21.61■■□□□ 1.05
TSPAN3-202ENST00000346495 LPCAT1Q8NF37 534 aa21.61■■□□□ 1.05
TSPAN3-202ENST00000346495 CALML6Q8TD86 181 aa21.61■■□□□ 1.05
TSPAN3-202ENST00000346495 CKAP2Q8WWK9 683 aa21.61■■□□□ 1.05
TSPAN3-202ENST00000346495 ISG20Q96AZ6 181 aaKnown RBP21.61■■□□□ 1.05
TSPAN3-202ENST00000346495 TM6SF2Q9BZW4 377 aa21.61■■□□□ 1.05
TSPAN3-202ENST00000346495 OBP2AQ9NY56 170 aa21.61■■□□□ 1.05
TSPAN3-202ENST00000346495 LINC01565O15544 149 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 SLC7A4O43246 635 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 ASMTLO95671 621 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 CRTAMO95727 393 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 ADH1CP00326 375 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 SRCP12931 536 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 CTSOP43234 321 aaPredicted RBP21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 NEK3P51956 506 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 WDR4P57081 412 aaKnown RBP21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 EML3Q32P44 896 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 SYCE2Q6PIF2 218 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 AHI1Q8N157 1196 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 OR13J1Q8NGT2 312 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 GDAP1Q8TB36 358 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 TCP10LQ8TDR4 215 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 PTPRN2Q92932 1015 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 TRPV4Q9HBA0 871 aa21.6■■□□□ 1.05
TSPAN3-202ENST00000346495 HOXC11O43248 304 aaPredicted RBP21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 CYP17A1P05093 508 aa21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 PDHA1P08559 390 aa21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 ADH5P11766 374 aa21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 HOXB8P17481 243 aaPredicted RBP21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 HADHAP40939 763 aa21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 SEC24CP53992 1094 aa21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 ACVR1Q04771 509 aa21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 HHATQ5VTY9 493 aa21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 NEPROQ6NW34 567 aa21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 BCAS4Q8TDM0 211 aa21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 STYXQ8WUJ0 223 aa21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 PDCD6IPQ8WUM4 868 aaKnown RBP21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 RPL10LQ96L21 214 aaKnown RBP21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 PAIP2Q9BPZ3 127 aaKnown RBP21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 MCMBPQ9BTE3 642 aa21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 CEP44Q9C0F1 390 aa21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 IQCGQ9H095 443 aaKnown RBP21.59■■□□□ 1.05
TSPAN3-202ENST00000346495 ANKRD66B4E2M5 251 aa21.58■■□□□ 1.05
TSPAN3-202ENST00000346495 FZD6O60353 706 aa21.58■■□□□ 1.05
TSPAN3-202ENST00000346495 PRKCGP05129 697 aa21.58■■□□□ 1.05
TSPAN3-202ENST00000346495 SERPINB8P50452 374 aa21.58■■□□□ 1.05
TSPAN3-202ENST00000346495 SNRPD1P62314 119 aaKnown RBP21.58■■□□□ 1.05
TSPAN3-202ENST00000346495 PRAMEP78395 509 aa21.58■■□□□ 1.05
TSPAN3-202ENST00000346495 ECT2LQ008S8 904 aa21.58■■□□□ 1.05
TSPAN3-202ENST00000346495 BCL2L1Q07817 233 aa21.58■■□□□ 1.05
TSPAN3-202ENST00000346495 TAF1AQ15573 450 aaPredicted RBP21.58■■□□□ 1.05
TSPAN3-202ENST00000346495 ARMC12Q5T9G4 340 aa21.58■■□□□ 1.05
TSPAN3-202ENST00000346495 LVRNQ6Q4G3 990 aa21.58■■□□□ 1.05
TSPAN3-202ENST00000346495 KIAA0408Q6ZU52 694 aa21.58■■□□□ 1.05
TSPAN3-202ENST00000346495 LMNTD2Q8IXW0 634 aa21.58■■□□□ 1.05
TSPAN3-202ENST00000346495 C2CD4AQ8NCU7 369 aaPredicted RBP21.58■■□□□ 1.05
TSPAN3-202ENST00000346495 OR2AP1Q8NGE2 309 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms