RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 ADRA1AP35348 466 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 ACVRL1P37023 503 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 ETV4P43268 484 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 RPS24P62847 133 aaKnown RBP12.95□□□□□ -0.34
CLK3-201ENST00000345005 XIAPP98170 497 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 ITKQ08881 620 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 ACSBG2Q5FVE4 666 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 CERCAMQ5T4B2 595 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 TMCO4Q5TGY1 634 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 PLPP4Q5VZY2 271 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 OR52E8Q6IFG1 317 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 MARK2Q7KZI7 788 aaKnown RBP12.95□□□□□ -0.34
CLK3-201ENST00000345005 ADGRG6Q86SQ4 1221 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 SETD3Q86TU7 594 aaPredicted RBP12.95□□□□□ -0.34
CLK3-201ENST00000345005 TMEM135Q86UB9 458 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 RFWD2Q8NHY2 731 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 PIP4K2CQ8TBX8 421 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 POF1BQ8WVV4 589 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 GBP5Q96PP8 586 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 APOL2Q9BQE5 337 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 FSD1LQ9BXM9 530 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 LRRC3Q9BY71 257 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 STN1Q9H668 368 aaKnown RBP12.95□□□□□ -0.34
CLK3-201ENST00000345005 TLR9Q9NR96 1032 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 SMPD4Q9NXE4 827 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 TAS2R1Q9NYW7 299 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 SOX13Q9UN79 622 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 ANKRD36A6QL64 1941 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 SPECC1L-ADORA2AF8WAN1 911 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 ATP9BO43861 1147 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 PMPCBO75439 489 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 SERPINB3P29508 390 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 ETFBP38117 255 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 ANKRD20A4Q4UJ75 823 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 PPM1LQ5SGD2 360 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 ARMC3Q5W041 872 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 RANBP10Q6VN20 620 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 GAREM2Q75VX8 874 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 TMC8Q8IU68 726 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 HS6ST3Q8IZP7 471 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 BBS5Q8N3I7 341 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLK3-201ENST00000345005 GATA6Q92908 595 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 WBP2Q969T9 261 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 PRICKLE1Q96MT3 831 aaPredicted RBP12.95□□□□□ -0.34
CLK3-201ENST00000345005 SLC22A12Q96S37 553 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 HTATIP2Q9BUP3 242 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 FICDQ9BVA6 458 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 TRIM4Q9C037 500 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 KCNK13Q9HB14 408 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 VCX3AQ9NNX9 186 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 TAGLN3Q9UI15 199 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 LSM7Q9UK45 103 aaKnown RBP12.95□□□□□ -0.34
CLK3-201ENST00000345005 ZNF510Q9Y2H8 683 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 TBC1D30Q9Y2I9 924 aa12.95□□□□□ -0.34
CLK3-201ENST00000345005 TRAV19A0A0A6YYK7 116 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 TYW5A2RUC4 315 aaKnown RBP12.94□□□□□ -0.34
CLK3-201ENST00000345005 EME2A4GXA9 379 aaPredicted RBP12.94□□□□□ -0.34
CLK3-201ENST00000345005 LINC01553A4QN01 128 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 HIDE1A8MVS5 230 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 TRIM49D1C9J1S8 452 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 C5orf67F2Z3F1 127 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 FCHO1O14526 889 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 COPEO14579 308 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 BIRC5O15392 142 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 KDELR3O43731 214 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 TSPAN3O60637 253 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 FGF19O95750 216 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 RB1P06400 928 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 RHOCP08134 193 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 TPH1P17752 444 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 MAGEA8P43361 318 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 SERPINB4P48594 390 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 CLCN2P51788 898 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 CLCN4P51793 760 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 WNT3AP56704 352 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 SLC7A9P82251 487 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 NIPAL4Q0D2K0 466 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 PCID2Q5JVF3 399 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 IL31Q6EBC2 164 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 POTEHQ6S545 545 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 KDELC1Q6UW63 502 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 KYAT3Q6YP21 454 aaKnown RBP12.94□□□□□ -0.34
CLK3-201ENST00000345005 PTCD2Q8WV60 388 aaKnown RBP12.94□□□□□ -0.34
CLK3-201ENST00000345005 ZNF669Q96BR6 464 aaPredicted RBP12.94□□□□□ -0.34
CLK3-201ENST00000345005 CERS2Q96G23 380 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 MRGPRX2Q96LB1 330 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 FCRL3Q96P31 734 aaPredicted RBP12.94□□□□□ -0.34
CLK3-201ENST00000345005 KIFC1Q9BW19 673 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 ATXN3LQ9H3M9 355 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 ARNT2Q9HBZ2 717 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 ASAH2Q9NR71 780 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 CHCHD3Q9NX63 227 aaKnown RBP12.94□□□□□ -0.34
CLK3-201ENST00000345005 CPQQ9Y646 472 aa12.94□□□□□ -0.34
CLK3-201ENST00000345005 A0A0D9SEW6 157 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 WDR91A4D1P6 747 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 COQ9O75208 318 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 TBX10O75333 385 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 TM7SF2O76062 418 aa12.93□□□□□ -0.34
CLK3-201ENST00000345005 CKMP06732 381 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms