RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 DNAJB1P25685 340 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 RENBPP51606 427 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 CYLC2Q14093 348 aaPredicted RBP21.57■■□□□ 1.04
CCDC38-201ENST00000344280 SFT2D3Q587I9 215 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 MARC1Q5VT66 337 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 FBXL22Q6P050 247 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 KBTBD6Q86V97 674 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 COLGALT2Q8IYK4 626 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 MYEOVQ96EZ4 313 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 PPP1R12CQ9BZL4 782 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 EBF3Q9H4W6 596 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 VTI1BQ9UEU0 232 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 COPG1Q9Y678 874 aaKnown RBP21.57■■□□□ 1.04
CCDC38-201ENST00000344280 A0A087X1B8 175 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 INPPL1O15357 1258 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 KIF1CO43896 1103 aaKnown RBP21.57■■□□□ 1.04
CCDC38-201ENST00000344280 HMBSP08397 361 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 ELNP15502 786 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 ETFBP38117 255 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 DPP6P42658 865 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 TECRLQ5HYJ1 363 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 RAP1GAP2Q684P5 730 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 MSANTD2Q6P1R3 559 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 LRRC49Q8IUZ0 686 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 KYQ8NBH2 561 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 RP9Q8TA86 221 aaKnown RBP21.57■■□□□ 1.04
CCDC38-201ENST00000344280 JADE3Q92613 823 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 PPP1R2P1Q96PQ5 205 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 CDRT15Q96T59 188 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 NCKIPSDQ9NZQ3 722 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 CCDC166P0CW27 439 aa21.56■■□□□ 1.04
CCDC38-201ENST00000344280 RHOQP17081 205 aa21.56■■□□□ 1.04
CCDC38-201ENST00000344280 LEPRP48357 1165 aaKnown RBP21.56■■□□□ 1.04
CCDC38-201ENST00000344280 HK2P52789 917 aa21.56■■□□□ 1.04
CCDC38-201ENST00000344280 THOP1P52888 689 aa21.56■■□□□ 1.04
CCDC38-201ENST00000344280 FCGRTP55899 365 aa21.56■■□□□ 1.04
CCDC38-201ENST00000344280 FAM26DQ5JW98 314 aa21.56■■□□□ 1.04
CCDC38-201ENST00000344280 RNF148Q8N7C7 305 aa21.56■■□□□ 1.04
CCDC38-201ENST00000344280 PDCD6IPQ8WUM4 868 aaKnown RBP21.56■■□□□ 1.04
CCDC38-201ENST00000344280 YIPF3Q9GZM5 350 aa21.56■■□□□ 1.04
CCDC38-201ENST00000344280 SP110Q9HB58 689 aa21.56■■□□□ 1.04
CCDC38-201ENST00000344280 ZBTB26Q9HCK0 441 aa21.56■■□□□ 1.04
CCDC38-201ENST00000344280 RGS18Q9NS28 235 aa21.56■■□□□ 1.04
CCDC38-201ENST00000344280 TMEM248Q9NWD8 314 aa21.56■■□□□ 1.04
CCDC38-201ENST00000344280 GTSE1Q9NYZ3 720 aa21.56■■□□□ 1.04
CCDC38-201ENST00000344280 MARCH4Q9P2E8 410 aaPredicted RBP21.56■■□□□ 1.04
CCDC38-201ENST00000344280 ARHGEF37A1IGU5 675 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 FAM155AB1AL88 458 aaPredicted RBP21.55■■□□□ 1.04
CCDC38-201ENST00000344280 STX16-NPEPL1H3BU86 382 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 SDHDO14521 159 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 NPHS1O60500 1241 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 PAX3P23760 479 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 ATP5F1P24539 256 aaPredicted RBP21.55■■□□□ 1.04
CCDC38-201ENST00000344280 NDST2P52849 883 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 VARS2Q5ST30 1063 aaKnown RBP21.55■■□□□ 1.04
CCDC38-201ENST00000344280 TMEM207Q6UWW9 146 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 PAXIP1Q6ZW49 1069 aaPredicted RBP21.55■■□□□ 1.04
CCDC38-201ENST00000344280 PDSS2Q86YH6 399 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 DCP1BQ8IZD4 617 aaKnown RBP21.55■■□□□ 1.04
CCDC38-201ENST00000344280 USP13Q92995 863 aaPredicted RBP21.55■■□□□ 1.04
CCDC38-201ENST00000344280 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.55■■□□□ 1.04
CCDC38-201ENST00000344280 UXTQ9UBK9 157 aaPredicted RBP21.55■■□□□ 1.04
CCDC38-201ENST00000344280 A8MT66 165 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 SLCO1B7G3V0H7 640 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 CFLARO15519 480 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 PRKAR2AP13861 404 aaKnown RBP21.55■■□□□ 1.04
CCDC38-201ENST00000344280 PKNOX1P55347 436 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 SULT2A1Q06520 285 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 PTPRCAPQ14761 206 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 SIRPB2Q5JXA9 342 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 RNF220Q5VTB9 566 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 KIAA0408Q6ZU52 694 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 PIWIL4Q7Z3Z4 852 aaKnown RBP21.55■■□□□ 1.04
CCDC38-201ENST00000344280 CILP2Q8IUL8 1156 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 ARRDC2Q8TBH0 407 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 GDPD5Q8WTR4 605 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 HDAC10Q969S8 669 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 PHF21BQ96EK2 531 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 C8orf48Q96LL4 319 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 CCDC28BQ9BUN5 200 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 STK39Q9UEW8 545 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 SCOCQ9UIL1 159 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 SLC27A5Q9Y2P5 690 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 VWA8A3KMH1 1905 aa21.55■■□□□ 1.04
CCDC38-201ENST00000344280 ZCCHC18P0CG32 403 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 CKBP12277 381 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 AQP4P55087 323 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 CDKN2DP55273 166 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 FAM83EQ2M2I3 478 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 HECTD2Q5U5R9 776 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 OR6P1Q8NGX9 317 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 MAELQ96JY0 434 aaKnown RBP21.54■■□□□ 1.04
CCDC38-201ENST00000344280 FBXO44Q9H4M3 255 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 ENO3P13929 434 aaPredicted RBP21.54■■□□□ 1.04
CCDC38-201ENST00000344280 XRCC1P18887 633 aaPredicted RBP21.54■■□□□ 1.04
CCDC38-201ENST00000344280 KCNC1P48547 511 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 ARPP19P56211 112 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 INHBEP58166 350 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 DNAJB13P59910 316 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 PFKPQ01813 784 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms