RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 SLC12A6Q9UHW9 1150 aa3.57□□□□□ -1.84
CCDC66-202ENST00000341455 PHTF1Q9UMS5 762 aa3.57□□□□□ -1.84
CCDC66-202ENST00000341455 TNPO3Q9Y5L0 923 aaKnown RBP3.57□□□□□ -1.84
CCDC66-202ENST00000341455 GPC6Q9Y625 555 aaPredicted RBP3.57□□□□□ -1.84
CCDC66-202ENST00000341455 MKI67P46013 3256 aaKnown RBP3.57□□□□□ -1.84
CCDC66-202ENST00000341455 PCSK5Q92824 1860 aa3.57□□□□□ -1.84
CCDC66-202ENST00000341455 ANKRD36A6QL64 1941 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 ZNF292O60281 2723 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 PRSS47A8MTI9 375 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 CD160O95971 181 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 CALCAP01258 141 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 CCDC175P0C221 793 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 SPATA31D3P0C874 917 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 PF4V1P10720 104 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 MBL2P11226 248 aaPredicted RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 NCAM1P13591 858 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 PDGFRAP16234 1089 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 TYRP1P17643 537 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 IL1R2P27930 398 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 ADH6P28332 368 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 MIPP30301 263 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 GJA4P35212 333 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 NUDT1P36639 197 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 RENBPP51606 427 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 PITX1P78337 314 aaPredicted RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 DEUP1Q05D60 604 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 AUHQ13825 339 aaKnown RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 RTP5Q14D33 572 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 SIX1Q15475 284 aaPredicted RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 HSP90AA4PQ58FG1 418 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 DCAF6Q58WW2 860 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 C10orf120Q5SQS8 335 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 SDHAF4Q5VUM1 108 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 OR6B2Q6IFH4 312 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 UNC5AQ6ZN44 842 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 SPATA31D4Q6ZUB0 917 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 BBS12Q6ZW61 710 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 CHSY3Q70JA7 882 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 RHOT1Q8IXI2 618 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 RCOR2Q8IZ40 523 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 CBARPQ8N350 705 aaPredicted RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 PQLC3Q8N755 202 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 RNF214Q8ND24 703 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 ARHGEF2Q92974 986 aaKnown RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 GAL3ST3Q96A11 431 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 SKA1Q96BD8 255 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 ECHDC3Q96DC8 303 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 CLIP3Q96DZ5 547 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 RBM41Q96IZ5 413 aaKnown RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 TBATAQ96M53 351 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 SNRNP25Q9BV90 132 aaKnown RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 PACSIN1Q9BY11 444 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 CPEB1Q9BZB8 566 aaKnown RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 GSX2Q9BZM3 304 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 IGFLR1Q9H665 355 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 ATP13A1Q9HD20 1204 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 ABCB8Q9NUT2 735 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 SPATA6Q9NWH7 488 aaPredicted RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 ZFATQ9P243 1243 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 USP36Q9P275 1121 aaKnown RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 RNF14Q9UBS8 474 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 FBXL21Q9UKT6 434 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 USP18Q9UMW8 372 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 NEU2Q9Y3R4 380 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 PCDHGA1Q9Y5H4 931 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 ADAMTS9Q9P2N4 1935 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 hCG_1818297A0A087WSY0 165 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 A0A1W2PQ67 120 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 ADARB2-AS1A8MUL3 147 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 TOR1BO14657 336 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 ZSCAN12O43309 604 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 AP1G1O43747 822 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 PRAMEF11O60813 436 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 ZNF821O75541 412 aaPredicted RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 GP1BBP13224 206 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 CR2P20023 1033 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 RGS7P49802 495 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 ARPP19P56211 112 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 CSTF1Q05048 431 aaKnown RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 IL10RBQ08334 325 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 FRG1Q14331 258 aaKnown RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 NCBP2-AS2Q69YL0 99 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 FBXL22Q6P050 247 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 C4orf22Q6V702 233 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 RFX8Q6ZV50 586 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 USP30Q70CQ3 517 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 KANSL1Q7Z3B3 1105 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 ANKS1BQ7Z6G8 1248 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 SCUBE1Q8IWY4 988 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 CCDC185Q8N715 623 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 MAB21L3Q8N8X9 362 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 TERB1Q8NA31 727 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 TMIEQ8NEW7 156 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 PPHLN1Q8NEY8 458 aaKnown RBP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 TRIM58Q8NG06 486 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 KIAA1524Q8TCG1 905 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 ACTRT1Q8TDG2 376 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 MYEOVQ96EZ4 313 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 MPP4Q96JB8 637 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 PKNOX2Q96KN3 472 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms