RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 INPP5DQ92835 1189 aa11.36□□□□□ -0.59
ATXN3-201ENST00000340660 KCNN1Q92952 543 aa11.36□□□□□ -0.59
ATXN3-201ENST00000340660 TMA16Q96EY4 203 aaKnown RBP11.36□□□□□ -0.59
ATXN3-201ENST00000340660 SPAG5Q96R06 1193 aa11.36□□□□□ -0.59
ATXN3-201ENST00000340660 SMOQ99835 787 aa11.36□□□□□ -0.59
ATXN3-201ENST00000340660 NUDT9Q9BW91 350 aa11.36□□□□□ -0.59
ATXN3-201ENST00000340660 SLC13A1Q9BZW2 595 aa11.36□□□□□ -0.59
ATXN3-201ENST00000340660 DDX19AQ9NUU7 478 aaKnown RBP11.36□□□□□ -0.59
ATXN3-201ENST00000340660 PIPSLA2A3N6 862 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 ADAM11O75078 769 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 KATNA1O75449 491 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 CREG1O75629 220 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 PAK4O96013 591 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-201ENST00000340660 SRPRAP08240 638 aaKnown RBP11.35□□□□□ -0.59
ATXN3-201ENST00000340660 ADSLP30566 484 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-201ENST00000340660 CCT6AP40227 531 aaKnown RBP11.35□□□□□ -0.59
ATXN3-201ENST00000340660 PFN3P60673 137 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 CCT2P78371 535 aaKnown RBP11.35□□□□□ -0.59
ATXN3-201ENST00000340660 EFEMP1Q12805 493 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 FAXCQ5TGI0 409 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 ADALQ6DHV7 355 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 B4GALNT3Q6L9W6 998 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 DYMQ7RTS9 669 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 HPS6Q86YV9 775 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 ESX1Q8N693 406 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 FDCSPQ8NFU4 85 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 BRF1Q92994 677 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 RNF31Q96EP0 1072 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 CCDC120Q96HB5 630 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 C18orf12Q96KH6 178 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 RPL10LQ96L21 214 aaKnown RBP11.35□□□□□ -0.59
ATXN3-201ENST00000340660 KLF6Q99612 283 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-201ENST00000340660 ING2Q9H160 280 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 SNX25Q9H3E2 840 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 ACSS2Q9NR19 701 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 KRT82Q9NSB4 513 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 LRIT1Q9P2V4 623 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 GTF3C3Q9Y5Q9 886 aa11.35□□□□□ -0.59
ATXN3-201ENST00000340660 ARGFXA6NJG6 315 aa11.34□□□□□ -0.59
ATXN3-201ENST00000340660 INHBBP09529 407 aa11.34□□□□□ -0.59
ATXN3-201ENST00000340660 CES1P23141 567 aa11.34□□□□□ -0.59
ATXN3-201ENST00000340660 STK19P49842 368 aaPredicted RBP11.34□□□□□ -0.59
ATXN3-201ENST00000340660 LIMK2P53671 638 aa11.34□□□□□ -0.59
ATXN3-201ENST00000340660 OR1D5P58170 312 aa11.34□□□□□ -0.59
ATXN3-201ENST00000340660 POU5F1Q01860 360 aaKnown RBP11.34□□□□□ -0.59
ATXN3-201ENST00000340660 Q0VFX4 171 aa11.34□□□□□ -0.59
ATXN3-201ENST00000340660 EDRF1Q3B7T1 1238 aa11.34□□□□□ -0.59
ATXN3-201ENST00000340660 FAM46CQ5VWP2 391 aa11.34□□□□□ -0.59
ATXN3-201ENST00000340660 MMS22LQ6ZRQ5 1243 aa11.34□□□□□ -0.59
ATXN3-201ENST00000340660 CHD1LQ86WJ1 897 aa11.34□□□□□ -0.59
ATXN3-201ENST00000340660 FSTL5Q8N475 847 aaPredicted RBP11.34□□□□□ -0.59
ATXN3-201ENST00000340660 FOXD4L4Q8WXT5 416 aaPredicted RBP11.34□□□□□ -0.59
ATXN3-201ENST00000340660 SMARCD1Q96GM5 515 aa11.34□□□□□ -0.59
ATXN3-201ENST00000340660 HPDLQ96IR7 371 aa11.34□□□□□ -0.59
ATXN3-201ENST00000340660 MTMR12Q9C0I1 747 aa11.34□□□□□ -0.59
ATXN3-201ENST00000340660 APMAPQ9HDC9 416 aa11.34□□□□□ -0.59
ATXN3-201ENST00000340660 AGO2Q9UKV8 859 aaKnown RBP11.34□□□□□ -0.59
ATXN3-201ENST00000340660 ZGRF1Q86YA3 2104 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 DDX3YO15523 660 aaKnown RBP11.33□□□□□ -0.6
ATXN3-201ENST00000340660 PCDH8O95206 1070 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 THRAP10827 490 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 CPA1P15085 419 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 PCSK2P16519 638 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 STAT1P42224 750 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 TRA2AQ13595 282 aaKnown RBP eCLIP11.33□□□□□ -0.6
ATXN3-201ENST00000340660 ARHGEF7Q14155 803 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 MAP7Q14244 749 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 ZNF235Q14590 738 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 ELOCQ15369 112 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 CEBPEQ15744 281 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 C8orf34Q49A92 452 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 PITRM1Q5JRX3 1037 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 ARMC10Q8N2F6 343 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 FRS2Q8WU20 508 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 TMEM121Q9BTD3 319 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 MED10Q9BTT4 135 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 SLC17A9Q9BYT1 436 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 TNFRSF10DQ9UBN6 386 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 B3GNT3Q9Y2A9 372 aa11.33□□□□□ -0.6
ATXN3-201ENST00000340660 PP2D1A8MPX8 630 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 TBL1XO60907 577 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 TACC1O75410 805 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 LY6G6DO95868 133 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 RECKO95980 971 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 MAP3K7CLP57077 242 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 ECT2LQ008S8 904 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 RUNX1T1Q06455 604 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 HLTFQ14527 1009 aaKnown RBP eCLIP11.32□□□□□ -0.6
ATXN3-201ENST00000340660 CDSNQ15517 529 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 HAUS3Q68CZ6 603 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 Q6ZUG5 572 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 TADA2BQ86TJ2 420 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 FUKQ8N0W3 1084 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 ACBD4Q8NC06 268 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 ZSWIM2Q8NEG5 633 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 CACTINQ8WUQ7 758 aaKnown RBP11.32□□□□□ -0.6
ATXN3-201ENST00000340660 OR8D1Q8WZ84 308 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 IKZF4Q9H2S9 585 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 AGPAT4Q9NRZ5 378 aa11.32□□□□□ -0.6
ATXN3-201ENST00000340660 TMEM9Q9P0T7 183 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms