RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 RFTN1Q14699 578 aaPredicted RBP22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 TEAD2Q15562 447 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 ZNF789Q5FWF6 425 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 KYAT3Q6YP21 454 aaKnown RBP22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 TRPM8Q7Z2W7 1104 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 YTHDF3Q7Z739 585 aaKnown RBP22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 LDB1Q86U70 411 aaPredicted RBP22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 SLC41A1Q8IVJ1 513 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 FAM217AQ8IXS0 508 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 OR6P1Q8NGX9 317 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 HDAC10Q969S8 669 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 ISL2Q96A47 359 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 TRIB3Q96RU7 358 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 GPR22Q99680 433 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 FBXO6Q9NRD1 293 aaPredicted RBP22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 KLHL14Q9P2G3 628 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 DNMT3BQ9UBC3 853 aaKnown RBP22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 VPS51Q9UID3 782 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 OR51B4Q9Y5P0 310 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 K7ERQ8 282 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 PLIN3O60664 434 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 BPGMP07738 259 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 HLA-DPA1P20036 260 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 KCNA4P22459 653 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 CORO7P57737 925 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 NTHL1P78549 312 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 ZNF460Q14592 562 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 USP10Q14694 798 aaKnown RBP22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 RAPH1Q70E73 1250 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 TNS4Q8IZW8 715 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 RIN3Q8TB24 985 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 RMDN1Q96DB5 314 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 FBXO5Q9UKT4 447 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 FGF1P05230 155 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 BST1Q10588 318 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 SLC5A9Q2M3M2 681 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 C2CD4AQ8NCU7 369 aaPredicted RBP22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 SH3RF2Q8TEC5 729 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 PDCD6IPQ8WUM4 868 aaKnown RBP22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 E2F7Q96AV8 911 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 ALG14Q96F25 216 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 SIRPGQ9P1W8 387 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 DCTN4Q9UJW0 460 aa22.59■■□□□ 1.21
PDLIM2-203ENST00000339162 NDST3O95803 873 aa22.58■■□□□ 1.21
PDLIM2-203ENST00000339162 EPOP01588 193 aa22.58■■□□□ 1.21
PDLIM2-203ENST00000339162 PTPRRQ15256 657 aa22.58■■□□□ 1.21
PDLIM2-203ENST00000339162 FASTKD1Q53R41 847 aaKnown RBP22.58■■□□□ 1.21
PDLIM2-203ENST00000339162 CNSTQ6PJW8 725 aa22.58■■□□□ 1.21
PDLIM2-203ENST00000339162 RBM23Q86U06 439 aaKnown RBP22.58■■□□□ 1.21
PDLIM2-203ENST00000339162 OR13C4Q8NGS5 318 aa22.58■■□□□ 1.21
PDLIM2-203ENST00000339162 TBATAQ96M53 351 aa22.58■■□□□ 1.21
PDLIM2-203ENST00000339162 HAUS2Q9NVX0 235 aa22.58■■□□□ 1.21
PDLIM2-203ENST00000339162 ATXN2Q99700 1313 aaKnown RBP22.58■■□□□ 1.21
PDLIM2-203ENST00000339162 DNAJC6O75061 913 aa22.58■■□□□ 1.2
PDLIM2-203ENST00000339162 PRLP01236 227 aa22.58■■□□□ 1.2
PDLIM2-203ENST00000339162 SLC4A1P02730 911 aa22.58■■□□□ 1.2
PDLIM2-203ENST00000339162 ATXN7L2Q5T6C5 722 aaPredicted RBP22.58■■□□□ 1.2
PDLIM2-203ENST00000339162 ZNF783Q6ZMS7 281 aa22.58■■□□□ 1.2
PDLIM2-203ENST00000339162 GPATCH11Q8N954 259 aa22.58■■□□□ 1.2
PDLIM2-203ENST00000339162 RFWD2Q8NHY2 731 aa22.58■■□□□ 1.2
PDLIM2-203ENST00000339162 DNAJC1Q96KC8 554 aaKnown RBP22.58■■□□□ 1.2
PDLIM2-203ENST00000339162 SPO11Q9Y5K1 396 aa22.58■■□□□ 1.2
PDLIM2-203ENST00000339162 MYO1CO00159 1063 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 MOSPD3O75425 235 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 PROCP04070 461 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 RHOP08100 348 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 PRAMEP78395 509 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 UGP2Q16851 508 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 C9orf50Q5SZB4 431 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 CEP97Q8IW35 865 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 NDNQ99608 321 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 FAM167BQ9BTA0 163 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 TDRD1Q9BXT4 1180 aaKnown RBP22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 C20orf27Q9GZN8 174 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 RAI2Q9Y5P3 530 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 FAM95CA0A1B0GW59 222 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 SIN3BO75182 1162 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 PAPSS2O95340 614 aaPredicted RBP22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 MPOP05164 745 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 CA3P07451 260 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 PTPN2P17706 415 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 ALDH3A1P30838 453 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 LIG3P49916 1009 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 CMTM8Q8IZV2 173 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 LPCAT1Q8NF37 534 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 OR6K2Q8NGY2 324 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 NUDCD1Q96RS6 583 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 TM6SF2Q9BZW4 377 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 MARCH4Q9P2E8 410 aaPredicted RBP22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 LHX3Q9UBR4 397 aa22.57■■□□□ 1.2
PDLIM2-203ENST00000339162 A0A0U1RQS6 177 aa22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 SMAD6O43541 496 aaKnown RBP22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 SLC8A1P32418 973 aa22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 CD70P32970 193 aa22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 CD151P48509 253 aa22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 RHOAP61586 193 aa22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 PCLAFQ15004 111 aa22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 FYB2Q5VWT5 728 aa22.56■■□□□ 1.2
PDLIM2-203ENST00000339162 SPATA6LQ8N4H0 392 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms