RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CNTD1Q8N815 330 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 GABPB2Q8TAK5 448 aaPredicted RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 ZSCAN18Q8TBC5 510 aaPredicted RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 STYXQ8WUJ0 223 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 AZIN2Q96A70 460 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 SMARCD1Q96GM5 515 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 MAELQ96JY0 434 aaKnown RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 FAR2Q96K12 515 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 TSNARE1Q96NA8 513 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 NECTIN4Q96NY8 510 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 FCRL3Q96P31 734 aaPredicted RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 FCRL5Q96RD9 977 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 TRIM56Q9BRZ2 755 aaKnown RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 TMEM175Q9BSA9 504 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 MLPHQ9BV36 600 aaPredicted RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 PRKD2Q9BZL6 878 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 POMKQ9H5K3 350 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 ZNF395Q9H8N7 513 aaPredicted RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 NMRAL1Q9HBL8 299 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 MRPL40Q9NQ50 206 aaKnown RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 TCF7L2Q9NQB0 619 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 DLGAP2Q9P1A6 1054 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 PSMD13Q9UNM6 376 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 MFHAS1Q9Y4C4 1052 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 IPPQ9Y573 584 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 TDRD15B5MCY1 1934 aaKnown RBP10.9□□□□□ -0.67
RTN3-201ENST00000338850 A0A087X1B8 175 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 ARHGEF37A1IGU5 675 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 RGSL1A5PLK6 1076 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 TARM1B6A8C7 271 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 HHLA1C9JL84 531 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 H0YJX3 145 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 NRP1O14786 923 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 LILRB3O75022 631 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 PENKP01210 267 aaPredicted RBP10.89□□□□□ -0.67
RTN3-201ENST00000338850 ALDH2P05091 517 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 PDHA1P08559 390 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 PDGFRBP09619 1106 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 ERVK-10P10266 1014 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 KITP10721 976 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 UQCRBP14927 111 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 PCSK1P29120 753 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 CD68P34810 354 aaPredicted RBP10.89□□□□□ -0.67
RTN3-201ENST00000338850 MTHFRP42898 656 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 HSPA13P48723 471 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 CACNA2D1P54289 1103 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 CREB5Q02930 508 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 SOX4Q06945 474 aaPredicted RBP10.89□□□□□ -0.67
RTN3-201ENST00000338850 TNK2Q07912 1038 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 SIGLEC14Q08ET2 396 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 NSUN2Q08J23 767 aaKnown RBP eCLIP10.89□□□□□ -0.67
RTN3-201ENST00000338850 SLC12A1Q13621 1099 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 CCNIQ14094 377 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 CFAP157Q5JU67 520 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 PCID2Q5JVF3 399 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 GLRA4Q5JXX5 417 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 OGFRL1Q5TC84 451 aaPredicted RBP10.89□□□□□ -0.67
RTN3-201ENST00000338850 KIAA0930Q6ICG6 404 aaPredicted RBP10.89□□□□□ -0.67
RTN3-201ENST00000338850 BHLHA9Q7RTU4 235 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 ZC3HC1Q86WB0 502 aaKnown RBP10.89□□□□□ -0.67
RTN3-201ENST00000338850 COLGALT2Q8IYK4 626 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 PGAM4Q8N0Y7 254 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 CCNYQ8ND76 341 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 OR52K1Q8NGK4 314 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 DTX3LQ8TDB6 740 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 PBXIP1Q96AQ6 731 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 CCDC126Q96EE4 140 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 ASIC4Q96FT7 647 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 RIPOR3Q96MK2 946 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 FAM193BQ96PV7 902 aaPredicted RBP10.89□□□□□ -0.67
RTN3-201ENST00000338850 RANBP9Q96S59 729 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 HAPLN3Q96S86 360 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 TSC22D3Q99576 134 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 IL12RB2Q99665 862 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 COLEC11Q9BWP8 271 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 ULBP1Q9BZM6 244 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 KLHL4Q9C0H6 718 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 CXCL16Q9H2A7 254 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 COG4Q9H9E3 785 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 TRPC7Q9HCX4 862 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 PNPOQ9NVS9 261 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 MARCH5Q9NX47 278 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 UTP6Q9NYH9 597 aaKnown RBP10.89□□□□□ -0.67
RTN3-201ENST00000338850 PLK2Q9NYY3 685 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 CNOT11Q9UKZ1 510 aaKnown RBP10.89□□□□□ -0.67
RTN3-201ENST00000338850 PPM1HQ9ULR3 514 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 POMPQ9Y244 141 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 HES2Q9Y543 173 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 MYO16Q9Y6X6 1858 aa10.89□□□□□ -0.67
RTN3-201ENST00000338850 DOCK4Q8N1I0 1966 aa10.88□□□□□ -0.67
RTN3-201ENST00000338850 ANKRD36A6QL64 1941 aa10.88□□□□□ -0.67
RTN3-201ENST00000338850 SMIM31A0A1B0GVY4 71 aa10.88□□□□□ -0.67
RTN3-201ENST00000338850 ARL5CA6NH57 179 aa10.88□□□□□ -0.67
RTN3-201ENST00000338850 TRPC5OSA6NMA1 111 aa10.88□□□□□ -0.67
RTN3-201ENST00000338850 WASH4PA8MWX3 477 aa10.88□□□□□ -0.67
RTN3-201ENST00000338850 C2CD4DB7Z1M9 353 aa10.88□□□□□ -0.67
RTN3-201ENST00000338850 PTGESO14684 152 aa10.88□□□□□ -0.67
RTN3-201ENST00000338850 DENRO43583 198 aaKnown RBP10.88□□□□□ -0.67
RTN3-201ENST00000338850 CREB3O43889 395 aa10.88□□□□□ -0.67
RTN3-201ENST00000338850 EFEMP2O95967 443 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms