RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 FZD10Q9ULW2 581 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 RAI2Q9Y5P3 530 aa6.92□□□□□ -1.3
SF3B1-201ENST00000335508 ZNF831Q5JPB2 1677 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 NRAPQ86VF7 1730 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 ZNF840PA6NDX5 716 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 MYO1CO00159 1063 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 MAGEC1O60732 1142 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 GUCY1B2O75343 617 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 EPB42P16452 691 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 FBXO43Q4G163 708 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 RELL1Q8IUW5 271 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 OR4L1Q8NH43 312 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 ZNF473Q8WTR7 871 aaKnown RBP6.91□□□□□ -1.3
SF3B1-201ENST00000335508 ARNTL2Q8WYA1 636 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 PRCCQ92733 491 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-201ENST00000335508 ZIC5Q96T25 663 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 CCT7Q99832 543 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 LRRC4CQ9HCJ2 640 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 DNAJC13O75165 2243 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 CACNB4O00305 520 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-201ENST00000335508 INSIG1O15503 277 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 MUM1Q2TAK8 710 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 RTP2Q5QGT7 225 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 MTSS1LQ765P7 747 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 PARP9Q8IXQ6 854 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 KLHL23Q8NBE8 558 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 SEC14L1Q92503 715 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 PRICKLE1Q96MT3 831 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-201ENST00000335508 SLC25A23Q9BV35 468 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 DNAJB4Q9UDY4 337 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 PSME2Q9UL46 239 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 A0A088AWK7 358 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 ELFN1P0C7U0 828 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 ZNF10P21506 573 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-201ENST00000335508 IL1R2P27930 398 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 KCNK10P57789 538 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 HSPA14Q0VDF9 509 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 AAK1Q2M2I8 961 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 LRRC34Q8IZ02 419 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 CCDC185Q8N715 623 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 OR10T2Q8NGX3 314 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 CD101Q93033 1021 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 KCTD15Q96SI1 283 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-201ENST00000335508 OMDQ99983 421 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 ZCWPW1Q9H0M4 648 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 IGFLR1Q9H665 355 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 PARVBQ9HBI1 364 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 ALG13Q9NP73 1137 aaKnown RBP6.91□□□□□ -1.3
SF3B1-201ENST00000335508 CASS4Q9NQ75 786 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 MARCOQ9UEW3 520 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-201ENST00000335508 PHTF1Q9UMS5 762 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 CDYLQ9Y232 598 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 DYRK1BQ9Y463 629 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 ORC6Q9Y5N6 252 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 MEIS3P2A8K0S8 358 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 MAP3K13O43283 966 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 ITGB6P18564 788 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 ADSLP30566 484 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-201ENST00000335508 MAGEA9P43362 315 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 GYS2P54840 703 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 CRY1Q16526 586 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 TXNDC11Q6PKC3 985 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 REPS1Q96D71 796 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 SLC39A8Q9C0K1 460 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 NOP53Q9NZM5 478 aaKnown RBP6.91□□□□□ -1.3
SF3B1-201ENST00000335508 LGALS13Q9UHV8 139 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 A0A1W2PRU2 124 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 RPP40O75818 363 aaKnown RBP6.91□□□□□ -1.3
SF3B1-201ENST00000335508 USP1O94782 785 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 TFEBP19484 476 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 RARS2Q5T160 578 aaKnown RBP6.91□□□□□ -1.3
SF3B1-201ENST00000335508 CCDC33Q8N5R6 958 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 AVL9Q8NBF6 648 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 CKAP2Q8WWK9 683 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 EVA1BQ9NVM1 165 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 OPTCQ9UBM4 332 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 GNPTGQ9UJJ9 305 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 CHKBQ9Y259 395 aa6.91□□□□□ -1.3
SF3B1-201ENST00000335508 A0A0U1RQJ8 604 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 GNGT2O14610 69 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 CASQ2O14958 399 aaPredicted RBP6.9□□□□□ -1.3
SF3B1-201ENST00000335508 KIAA0355O15063 1070 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 NPC1O15118 1278 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 SOCS5O75159 536 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 BAG2O95816 211 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 MLYCDO95822 493 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 CDH2P19022 906 aaPredicted RBP6.9□□□□□ -1.3
SF3B1-201ENST00000335508 DNAJB1P25685 340 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 COPAP53621 1224 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 HNRNPH2P55795 449 aaKnown RBP6.9□□□□□ -1.3
SF3B1-201ENST00000335508 RAB10P61026 200 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 BOP1Q14137 746 aaKnown RBP6.9□□□□□ -1.3
SF3B1-201ENST00000335508 FAM133BQ5BKY9 247 aaKnown RBP6.9□□□□□ -1.3
SF3B1-201ENST00000335508 TSTD2Q5T7W7 516 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 FAM171BQ6P995 826 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 SRLQ86TD4 932 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 TRAPPC5Q8IUR0 188 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 TSEN2Q8NCE0 465 aaKnown RBP6.9□□□□□ -1.3
SF3B1-201ENST00000335508 OR4K2Q8NGD2 314 aa6.9□□□□□ -1.3
SF3B1-201ENST00000335508 SLC26A7Q8TE54 656 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms