RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 GCNAQ96QF7 691 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 BCAP29Q9UHQ4 241 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 MIA3Q5JRA6 1907 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 PEX11BO96011 259 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 ME2P23368 584 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 SERPINH1P50454 418 aaKnown RBP23.56■■□□□ 1.36
NDEL1-201ENST00000334527 PFKPQ01813 784 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 FOLH1Q04609 750 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 SLC39A12Q504Y0 691 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 AGAP9Q5VTM2 703 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 PNPLA1Q8N8W4 532 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 IMP4Q96G21 291 aaKnown RBP23.56■■□□□ 1.36
NDEL1-201ENST00000334527 UROC1Q96N76 676 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 BTBD9Q96Q07 612 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 ARNT2Q9HBZ2 717 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 EME2A4GXA9 379 aaPredicted RBP23.55■■□□□ 1.36
NDEL1-201ENST00000334527 A8MT66 165 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 LTA4HP09960 611 aaKnown RBP23.55■■□□□ 1.36
NDEL1-201ENST00000334527 CCDC166P0CW27 439 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 CD86P42081 329 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 RENBPP51606 427 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 CLCN5P51795 746 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 ATXN3P54252 364 aaPredicted RBP23.55■■□□□ 1.36
NDEL1-201ENST00000334527 NRG1Q02297 640 aaPredicted RBP23.55■■□□□ 1.36
NDEL1-201ENST00000334527 RFTN1Q14699 578 aaPredicted RBP23.55■■□□□ 1.36
NDEL1-201ENST00000334527 PDK3Q15120 406 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 ZFP1Q6P2D0 407 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 FBXL19Q6PCT2 694 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 C17orf99Q6UX52 265 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 PELI3Q8N2H9 469 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 DCUN1D1Q96GG9 259 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 LRGUKQ96M69 825 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 ABI2Q9NYB9 513 aaPredicted RBP23.55■■□□□ 1.36
NDEL1-201ENST00000334527 WASH4PA8MWX3 477 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 J3KR12 359 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 IPO13O94829 963 aaKnown RBP23.55■■□□□ 1.36
NDEL1-201ENST00000334527 LEPRP48357 1165 aaKnown RBP23.55■■□□□ 1.36
NDEL1-201ENST00000334527 RPL26P61254 145 aaKnown RBP23.55■■□□□ 1.36
NDEL1-201ENST00000334527 SATB1Q01826 763 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 DSC3Q14574 896 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 KLC3Q6P597 504 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 GK5Q6ZS86 529 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 RPS27LQ71UM5 84 aaKnown RBP23.55■■□□□ 1.36
NDEL1-201ENST00000334527 CCDC126Q96EE4 140 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 KLHL5Q96PQ7 755 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 ATP13A1Q9HD20 1204 aa23.55■■□□□ 1.36
NDEL1-201ENST00000334527 TYMPP19971 482 aa23.54■■□□□ 1.36
NDEL1-201ENST00000334527 PLK1P53350 603 aa23.54■■□□□ 1.36
NDEL1-201ENST00000334527 POLE2P56282 527 aa23.54■■□□□ 1.36
NDEL1-201ENST00000334527 CACNB2Q08289 660 aaPredicted RBP23.54■■□□□ 1.36
NDEL1-201ENST00000334527 SDHAF4Q5VUM1 108 aa23.54■■□□□ 1.36
NDEL1-201ENST00000334527 GABPB2Q8TAK5 448 aaPredicted RBP23.54■■□□□ 1.36
NDEL1-201ENST00000334527 HMCESQ96FZ2 354 aa23.54■■□□□ 1.36
NDEL1-201ENST00000334527 C1orf74Q96LT6 269 aa23.54■■□□□ 1.36
NDEL1-201ENST00000334527 ARHGEF37A1IGU5 675 aa23.54■■□□□ 1.36
NDEL1-201ENST00000334527 PIM1P11309 404 aaPredicted RBP23.54■■□□□ 1.36
NDEL1-201ENST00000334527 SLC10A7Q0GE19 358 aa23.54■■□□□ 1.36
NDEL1-201ENST00000334527 RARS2Q5T160 578 aaKnown RBP23.54■■□□□ 1.36
NDEL1-201ENST00000334527 PTAR1Q7Z6K3 402 aaPredicted RBP23.54■■□□□ 1.36
NDEL1-201ENST00000334527 OR13J1Q8NGT2 312 aa23.54■■□□□ 1.36
NDEL1-201ENST00000334527 PABPC5Q96DU9 382 aaKnown RBP23.54■■□□□ 1.36
NDEL1-201ENST00000334527 TSPAN17Q96FV3 270 aa23.54■■□□□ 1.36
NDEL1-201ENST00000334527 RANBP9Q96S59 729 aa23.54■■□□□ 1.36
NDEL1-201ENST00000334527 EML4Q9HC35 981 aaKnown RBP23.54■■□□□ 1.36
NDEL1-201ENST00000334527 TNFRSF12AQ9NP84 129 aa23.54■■□□□ 1.36
NDEL1-201ENST00000334527 TLR6Q9Y2C9 796 aa23.54■■□□□ 1.36
NDEL1-201ENST00000334527 HSPA1AP0DMV8 641 aaKnown RBP23.53■■□□□ 1.36
NDEL1-201ENST00000334527 HSPA1BP0DMV9 641 aaKnown RBP23.53■■□□□ 1.36
NDEL1-201ENST00000334527 HAPLN1P10915 354 aaPredicted RBP23.53■■□□□ 1.36
NDEL1-201ENST00000334527 ARSAP15289 507 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 PAX3P23760 479 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 DSC2Q02487 901 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 ADGRE1Q14246 886 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 GRM2Q14416 872 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 LPIN1Q14693 890 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 HECTD2Q5U5R9 776 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 MARC1Q5VT66 337 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 UMODL1-AS1Q8N2C9 162 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 GALNT15Q8N3T1 639 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 AFAP1L2Q8N4X5 818 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 SPPL2BQ8TCT7 592 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 PHF21BQ96EK2 531 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 FAR2Q96K12 515 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 CENPKQ9BS16 269 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 COPS7BQ9H9Q2 264 aaPredicted RBP23.53■■□□□ 1.36
NDEL1-201ENST00000334527 FNIP2Q9P278 1114 aa23.53■■□□□ 1.36
NDEL1-201ENST00000334527 BCAS2O75934 225 aaPredicted RBP23.52■■□□□ 1.36
NDEL1-201ENST00000334527 TCN1P20061 433 aaPredicted RBP23.52■■□□□ 1.36
NDEL1-201ENST00000334527 LIN52Q52LA3 116 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 CUZD1Q86UP6 607 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 CILP2Q8IUL8 1156 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 MRPL1Q9BYD6 325 aaKnown RBP23.52■■□□□ 1.36
NDEL1-201ENST00000334527 PCDHB8Q9UN66 801 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 CCL22O00626 93 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 MYCNP04198 464 aaPredicted RBP23.52■■□□□ 1.36
NDEL1-201ENST00000334527 RBP1P09455 135 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 NDST2P52849 883 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 HUNKP57058 714 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 C1QTNF8P60827 252 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 PTK2BQ14289 1009 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms