RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 AP2A1O95782 977 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 NAT2P11245 290 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 BMXP51813 675 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 PFKPQ01813 784 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 GNA12Q03113 381 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 INCA1Q0VD86 236 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 LRP8Q14114 963 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 SLC10A6Q3KNW5 377 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 NANOGP8Q6NSW7 305 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 KCTD8Q6ZWB6 473 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 ZC3HC1Q86WB0 502 aaKnown RBP13.84□□□□□ -0.19
SYNE3-201ENST00000334258 IFNEQ86WN2 208 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 C12orf42Q96LP6 360 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 SLC25A23Q9BV35 468 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 NPLQ9BXD5 320 aaPredicted RBP13.84□□□□□ -0.19
SYNE3-201ENST00000334258 TUBA8Q9NY65 449 aaPredicted RBP13.84□□□□□ -0.19
SYNE3-201ENST00000334258 EEF2KO00418 725 aaKnown RBP13.83□□□□□ -0.2
SYNE3-201ENST00000334258 IQCF3P0C7M6 154 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 SLC35E2BP0CK96 405 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 STMN1P16949 149 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 STX1BP61266 288 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 ZBTB17Q13105 803 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 KCTD2Q14681 263 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 PLCL1Q15111 1095 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 KIF19Q2TAC6 998 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 CNSTQ6PJW8 725 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 ERMP1Q7Z2K6 904 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 DEFB106AQ8N104 65 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 OSBPL10Q9BXB5 764 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 CCDC68Q9H2F9 335 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 RHOJQ9H4E5 214 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 KIAA1217Q5T5P2 1943 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 IGKV6D-21A0A0A0MT36 114 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 HCRTO43612 131 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 HSPA1AP0DMV8 641 aaKnown RBP13.83□□□□□ -0.2
SYNE3-201ENST00000334258 HSPA1BP0DMV9 641 aaKnown RBP13.83□□□□□ -0.2
SYNE3-201ENST00000334258 FASP25445 335 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 GLUD2P49448 558 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 PPIL2Q13356 520 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 SQLEQ14534 574 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 INPP5AQ14642 412 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 RGS21Q2M5E4 152 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 NT5DC4Q86YG4 428 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 ANKFN1Q8N957 763 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 ELMO2Q96JJ3 720 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 GPR22Q99680 433 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 PTBP2Q9UKA9 531 aaKnown RBP13.83□□□□□ -0.2
SYNE3-201ENST00000334258 FADS3Q9Y5Q0 445 aa13.83□□□□□ -0.2
SYNE3-201ENST00000334258 DHRS12A0PJE2 317 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 GLTPD2A6NH11 291 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 TRIM24O15164 1050 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 BMP2P12643 396 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 ATP6V1B2P21281 511 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 TTKP33981 857 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 SLC26A9Q7LBE3 791 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 PIWIL4Q7Z3Z4 852 aaKnown RBP13.82□□□□□ -0.2
SYNE3-201ENST00000334258 DENND6AQ8IWF6 608 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 CENPLQ8N0S6 344 aaPredicted RBP13.82□□□□□ -0.2
SYNE3-201ENST00000334258 TMEM151AQ8N4L1 468 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 SPPL2BQ8TCT7 592 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 PHF21BQ96EK2 531 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 MRPL46Q9H2W6 279 aaKnown RBP13.82□□□□□ -0.2
SYNE3-201ENST00000334258 ASB7Q9H672 318 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 SOX17Q9H6I2 414 aaPredicted RBP13.82□□□□□ -0.2
SYNE3-201ENST00000334258 OAZ3Q9UMX2 235 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 MCM3APO60318 1980 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 CFAP99D6REC4 459 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 ESRRBO95718 433 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 AHSGP02765 367 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 TSPAN8P19075 237 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 PSMA4P25789 261 aaKnown RBP13.82□□□□□ -0.2
SYNE3-201ENST00000334258 PTPN3P26045 913 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 HADHAP40939 763 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 ACADVLP49748 655 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 MPP1Q00013 466 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 CSHL1Q14406 222 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 GEN1Q17RS7 908 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 TRIM16LQ309B1 348 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 TMEM214Q6NUQ4 689 aaKnown RBP13.82□□□□□ -0.2
SYNE3-201ENST00000334258 ABRAXAS1Q6UWZ7 409 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 ZDHHC17Q8IUH5 632 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 SPNS2Q8IVW8 549 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 TTC39CQ8N584 583 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 TXNDC5Q8NBS9 432 aaKnown RBP13.82□□□□□ -0.2
SYNE3-201ENST00000334258 DNAI2Q9GZS0 605 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 PKD2L2Q9NZM6 624 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 A0A0G2JLL6 359 aaPredicted RBP13.82□□□□□ -0.2
SYNE3-201ENST00000334258 C9JVG2 144 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 ZNF701M0R085 212 aaPredicted RBP13.82□□□□□ -0.2
SYNE3-201ENST00000334258 CNMDO75829 334 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 CELF2O95319 508 aaKnown RBP13.82□□□□□ -0.2
SYNE3-201ENST00000334258 ICAM3P32942 547 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 PITX1P78337 314 aaPredicted RBP13.82□□□□□ -0.2
SYNE3-201ENST00000334258 TNFAIP2Q03169 654 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 MBTD1Q05BQ5 628 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 FAM83EQ2M2I3 478 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 C6orf10Q5SRN2 563 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 PRAMEF19Q5SWL8 479 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 GALNT18Q6P9A2 607 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 PRRT2Q7Z6L0 340 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms