RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 PCDHB5Q9Y5E4 795 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 MUSKO15146 869 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 PRSS56P0CW18 603 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 TCN1P20061 433 aaPredicted RBP19.07■□□□□ 0.64
RFTN1-201ENST00000334133 KCNQ1P51787 676 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 SIRPB2Q5JXA9 342 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 KIAA0930Q6ICG6 404 aaPredicted RBP19.07■□□□□ 0.64
RFTN1-201ENST00000334133 PGM2L1Q6PCE3 622 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 ZNF683Q8IZ20 524 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 SMIM14Q96QK8 99 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 IGSF5Q9NSI5 407 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 MID2Q9UJV3 735 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 CDYLQ9Y232 598 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 LRCH1Q9Y2L9 728 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 HDCP19113 662 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 YWHAQP27348 245 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 OR1E1P30953 314 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 HNRNPDQ14103 355 aaKnown RBP19.07■□□□□ 0.64
RFTN1-201ENST00000334133 ACAD11Q709F0 780 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 TBATAQ96M53 351 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 SEMA3CQ99985 751 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 PRDM5Q9NQX1 630 aaPredicted RBP19.07■□□□□ 0.64
RFTN1-201ENST00000334133 ARL5AQ9Y689 179 aa19.07■□□□□ 0.64
RFTN1-201ENST00000334133 SCAMP3O14828 347 aaKnown RBP19.06■□□□□ 0.64
RFTN1-201ENST00000334133 CCNT2O60583 730 aaKnown RBP19.06■□□□□ 0.64
RFTN1-201ENST00000334133 MYCP01106 439 aaPredicted RBP19.06■□□□□ 0.64
RFTN1-201ENST00000334133 DNAJB2P25686 324 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 KCNC1P48547 511 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 CDKN2DP55273 166 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 PRAMEP78395 509 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 SREBF2Q12772 1141 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 POLD3Q15054 466 aaPredicted RBP19.06■□□□□ 0.64
RFTN1-201ENST00000334133 UMODL1-AS1Q8N2C9 162 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 FBXW8Q8N3Y1 598 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 KDM1BQ8NB78 822 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 FAM156AQ8NDB6 213 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 EXOC2Q96KP1 924 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 CDRT15Q96T59 188 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 NPAS2Q99743 824 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 HEATR9A2RTY3 570 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 LINGO3P0C6S8 592 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 ZCCHC18P0CG32 403 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 CRABP2P29373 138 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 DUSP4Q13115 394 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 GPR158Q5T848 1215 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 RDH11Q8TC12 318 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 YIPF3Q9GZM5 350 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 ALG9Q9H6U8 611 aa19.06■□□□□ 0.64
RFTN1-201ENST00000334133 A0A0D9SEW6 157 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 H2AFYO75367 372 aaKnown RBP19.05■□□□□ 0.64
RFTN1-201ENST00000334133 RAG1P15918 1043 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 RHOQP17081 205 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 CDC16Q13042 620 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 NFE2Q16621 373 aaPredicted RBP19.05■□□□□ 0.64
RFTN1-201ENST00000334133 PPP1R3AQ16821 1122 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 TMEM207Q6UWW9 146 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 ISLR2Q6UXK2 745 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 RNF19BQ6ZMZ0 732 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 TMEM173Q86WV6 379 aaPredicted RBP19.05■□□□□ 0.64
RFTN1-201ENST00000334133 DSELQ8IZU8 1212 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 PCSK9Q8NBP7 692 aaKnown RBP19.05■□□□□ 0.64
RFTN1-201ENST00000334133 OR52K2Q8NGK3 314 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 FBXO44Q9H4M3 255 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 FNDC3AQ9Y2H6 1198 aaKnown RBP19.05■□□□□ 0.64
RFTN1-201ENST00000334133 ATP6AP2A0A1C7CYW4 349 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 RAMP2O60895 175 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 ATP6AP2O75787 350 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 PEX2P28328 305 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 PEX19P40855 299 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 FBXO48Q5FWF7 155 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 TMA16Q96EY4 203 aaKnown RBP19.05■□□□□ 0.64
RFTN1-201ENST00000334133 C1orf74Q96LT6 269 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 VWA8A3KMH1 1905 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 CYLC2Q14093 348 aaPredicted RBP19.05■□□□□ 0.64
RFTN1-201ENST00000334133 TMCO4Q5TGY1 634 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 HECTD2Q5U5R9 776 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 TRAF7Q6Q0C0 670 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 ABI1Q8IZP0 508 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 OR13C4Q8NGS5 318 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 GLT1D1Q96MS3 346 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 MRPL57Q9BQC6 102 aaKnown RBP19.05■□□□□ 0.64
RFTN1-201ENST00000334133 RTKNQ9BST9 563 aa19.05■□□□□ 0.64
RFTN1-201ENST00000334133 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.05■□□□□ 0.64
RFTN1-201ENST00000334133 COPG1Q9Y678 874 aaKnown RBP19.05■□□□□ 0.64
RFTN1-201ENST00000334133 DOCK4Q8N1I0 1966 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 ARHGEF37A1IGU5 675 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 THOP1P52888 689 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 NSUN2Q08J23 767 aaKnown RBP eCLIP19.04■□□□□ 0.64
RFTN1-201ENST00000334133 CLEC6AQ6EIG7 209 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 GK5Q6ZS86 529 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 TAS1R1Q7RTX1 841 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 SDCCAG8Q86SQ7 713 aaPredicted RBP19.04■□□□□ 0.64
RFTN1-201ENST00000334133 ARRDC2Q8TBH0 407 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 ECSITQ9BQ95 431 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 TMEM248Q9NWD8 314 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 NCKIPSDQ9NZQ3 722 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 RGSL1A5PLK6 1076 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 A6NHS1 94 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 A8MT66 165 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 THRAP10827 490 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms